| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4472 |
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| Symbol | |
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| ID | 3972484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4973976 |
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| End bp | 4975532 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927583 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_534314 |
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| Protein GI | 90425944 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGC TGGTACAACT GCTGGAGTTT GGGGCGCCCG GCGCGAAGTC GCTCGAGGAA
ATTCGGCAGC AGGTCGCCAG CGCAGGCTGC AGTTCGAAGG GCGGCAGCGG CAAGTCGAGC
TGCGGCTCGG CAGCCGGGCA GGGCGATCTC GCCCCCGAGG TCTGGGAGAA GGTCAAGAAC
CATCCCTGCT ACAGCGAACA GGCGCATCAT CACTTCGCCC GCATGCATGT CGCGGTGGCG
CCGGCCTGCA ACATCCAGTG CAACTACTGT AATCGCAAAT ACGATTGCGC CAACGAATCG
CGCCCCGGCG TGGTCAGCGA GAAGCTGACT CCCGAACAGG CGGCGAAGAA GGTGCTGGCG
GTCGCCTCCA GCGTGCCGCA GATGACCGTG CTCGGCGTCG CCGGCCCCGG CGATCCGTTG
GCCAATCCGC AAAAGACCTT CAAGACCTTC GAACTGGTGT CGGCGACTGC GCCGGACATC
AAGCTGTGCC TGTCCACCAA CGGCCTGATG CTGCCCGACC ACGTCGATCG CATCCAGGCG
ATGAACGTCG ACCACGTCAC CATCACCATC AACATGATCG ACCCGGAAAT CGGCGCCAAG
ATCTATCCGT GGATCTTCTA CAACCACCGC CGCTACGAGG GCGTCGAGGC GTCGAAGATC
CTCAGCGAGC GGCAATTGCT TGGGCTCGAA ATGCTCACCG CGCGGGGCAT CCTGGTCAAA
GTCAATTCGG TGATGATCCC CGGCGTTAAC GACAAGCACC TGGTCGAGGT CAACAAGGCG
GTGAAGTCGC GCGGCGCCTT CCTGCACAAC ATCATGCCGC TGATCTCCGA GCCGGAGCAT
GGCACGGTGT ACGGCCTGTC CGGGCTGCGT GGCCCGTCGG CGCAGGAATT GAAAGCGCTG
CAGGACGCCT GCGAAGGCGA GATGAACATG ATGCGGCATT GCCGGCAGTG CCGCGCCGAC
GCCGTCGGCC TGCTTGGCGA GGACCGCAGC GACGAATTCT CCAACGAGAA GGTCGCGGCG
ATGGAGGTCA CCTACGACCT CGAAGCCCGC AAGGCCTATC AGGCCAAGGT CGAGCTGGAG
CGCGAGGCGA TCGCCAAGGC CAAGACCGCC GAGCTGGTGA AACTCGCCGA CGAGACCAGC
GCCATCAAGA TCCAGGTGGC GATCGCCACC AAGGGCGGTG GCCGGGTCAA CGAGCATTTC
GGCCACGCCC ACGAATTCCA GATCTACGAG GTCTCCACCG CCGGCGCCAA ATTCGTCGGC
CACCGCCGCG TCGATCTGTA TTGCGAAGGC GGCTACGCCT CCGCCGACGG TGCCGCCACC
ATCATCCGCG CCTTGAACGA CTGCACCGCG GTGCTGGTCG CCAAGATCGG CATCTGCCCG
AAGGATTCGC TCGCCGCGGC TGGCATCGAG GCGGTGGAAA CCTACGCCTT CGAGTTCATC
GAGACCTCGG TGATCGCCTA CTTCAAGGAC TACCTGCAGC GCGTCGAGAA GAAGGAAATC
AGCCACGTCG CCAAGGGTGA CGCCGACATT CGTCAGGGGG CATTCACCGA GGCCTGA
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| Protein sequence | MQKLVQLLEF GAPGAKSLEE IRQQVASAGC SSKGGSGKSS CGSAAGQGDL APEVWEKVKN
HPCYSEQAHH HFARMHVAVA PACNIQCNYC NRKYDCANES RPGVVSEKLT PEQAAKKVLA
VASSVPQMTV LGVAGPGDPL ANPQKTFKTF ELVSATAPDI KLCLSTNGLM LPDHVDRIQA
MNVDHVTITI NMIDPEIGAK IYPWIFYNHR RYEGVEASKI LSERQLLGLE MLTARGILVK
VNSVMIPGVN DKHLVEVNKA VKSRGAFLHN IMPLISEPEH GTVYGLSGLR GPSAQELKAL
QDACEGEMNM MRHCRQCRAD AVGLLGEDRS DEFSNEKVAA MEVTYDLEAR KAYQAKVELE
REAIAKAKTA ELVKLADETS AIKIQVAIAT KGGGRVNEHF GHAHEFQIYE VSTAGAKFVG
HRRVDLYCEG GYASADGAAT IIRALNDCTA VLVAKIGICP KDSLAAAGIE AVETYAFEFI
ETSVIAYFKD YLQRVEKKEI SHVAKGDADI RQGAFTEA
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