Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4434 |
Symbol | |
ID | 3970377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4941892 |
End bp | 4943082 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637927545 |
Product | phosphonate metabolism PhnM |
Protein accession | YP_534276 |
Protein GI | 90425906 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAT TGAGCATCGA AGGCGGCAGC GTGCTGCTGG GCGATCAATT CCACGATGTC AGCGTCAAAC TCGGCGACGG CCGGATCGCG GCCATCGACC TGAAGGCCGC CGCCGGCGCG ACGCTCGACG CGCGCGGGCT GAAGCTGTTG CCCGGCATCG TCGATATCCA CGGCGACGCC TTCGAGCGGC AGATGATGCC GCGGCCGGGC GTCGATTTCC CGATCGACAT TGCGCTGTGC GAAAGCGACC GCCAGGCGAT CGGCAACGGC ATCACCACGG TGTTTCACGC CGCGACCTGG TCGTGGGAGC CGGGCTTGCG CAGCGGCGCC AACGCCGAGC GGCTGCTCAA CGCGATCGAG ACGCTGCGGC CACAGCTCGC CGCCGACACC CGCTTCCACC TGCGCCATGA GACCTACAAT CTCGACGCCG AACACACTAT CAAGCATTGG ATCGCCGCCG GCCGGATCGA TCTGTTGGCG TTCAACGATC ACACCGAGTC CACCGTCGCG GCTCTCGACA AGCCGGCCAA GCGCAACCGC ATGGTGGAGC GCTCCGGCGT CAGCCATGAC GAGTTCGACA GGATCGTCTC GCACGTCGTG GCGCGGCATC ACGAGGTGCC TGGCTCGATC GCACGGCTGG CGGAAACCGC GCGCGCGGTG CAGCTGAAGA TGCTGTCGCA TGACGACGAC ACCCCCGAGC TGCGGCAAGC GTTTCGCGAC CAGGGCGTGG CGATCGCCGA ATTCCCGGTC AACGAACCGA CCGCGCGGGC GGCGATCGAC GGCGGCGACG TCACCGTGTT CGGCGCGCCG AATGTGGTGC GCGGCGGCAG CCACACCGGC TGGACCAAGG CCGCCGACAT GATCGCCAAC GGGCTGTGCT CGATTCTGGC GTCGGATTAC TACTATCCGG CACCGCTGTT GGCGGCGTTC CGGCTGGTCG CCGACGGCGT TCTGCCGTTG GCCGAGGCGT GGACGCTGGT GTCGTCGGCG CCGGCCAAGG CGGTCGGCCT CACCGACCGC GGCGTGATCG CCGAAGGCCG CCGCGCCGAT CTGATCCTGG TCGACGACGC GGTGGCGCTG CGGCCGCGGC TGGTCGCGGC GATCGCCGCC GGCCGGCTGG TCTATCTCCG CGAGGCCGAA CGTCTCAGCG GCGAACAGCC GGCGTTGCGC ACGGCGTTTG CAGCGGCGTG A
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Protein sequence | MSALSIEGGS VLLGDQFHDV SVKLGDGRIA AIDLKAAAGA TLDARGLKLL PGIVDIHGDA FERQMMPRPG VDFPIDIALC ESDRQAIGNG ITTVFHAATW SWEPGLRSGA NAERLLNAIE TLRPQLAADT RFHLRHETYN LDAEHTIKHW IAAGRIDLLA FNDHTESTVA ALDKPAKRNR MVERSGVSHD EFDRIVSHVV ARHHEVPGSI ARLAETARAV QLKMLSHDDD TPELRQAFRD QGVAIAEFPV NEPTARAAID GGDVTVFGAP NVVRGGSHTG WTKAADMIAN GLCSILASDY YYPAPLLAAF RLVADGVLPL AEAWTLVSSA PAKAVGLTDR GVIAEGRRAD LILVDDAVAL RPRLVAAIAA GRLVYLREAE RLSGEQPALR TAFAAA
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