Gene RPC_4433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4433 
Symbol 
ID3970376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4941215 
End bp4941895 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID637927544 
Productputative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) 
Protein accessionYP_534275 
Protein GI90425905 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID[TIGR03308] phosphonate metabolim protein, transferase hexapeptide repeat family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGC TGATGGCTGA CAAAAATCTC TCCTTGGTTC CTTGCATCGC CGCATCCGCC 
AGCGTGCACG ATTGCACGCT CGGCGCTTAT TGCGAGGTGG GCGCGCGCAC TTCGCTGCTG
GAAGTGGCGA TGGGCGATTA CTCCTATGTC GTCAACGACA GCCAGATCGC CTATGCGACG
ATCGGCAAGT TCTGCTCGAT CGCGGCGATG ACCCGGATCA ATCCCGGCAA TCACCCGATG
CAGCGCGCTG CACAAGCACA TTTCACCTAC CGCGCCAGCG CTTACTTCGA CGGCGAGCCC
GACGACGCTG AGTTCTTCGC GTGGCGGCGG CAGCATCACG TGACGATCGG CCACGATGTC
TGGATCGGCC ATGGGGCGAT TCTGCTGCCG GGCCGCAACG TCGGCACAGG CGCGGTGATC
GCGGCCGGCG CGGTGGTCAC CAAGGACGTC GCGCCCTACA GCATCGTCGG CGGCAATCCG
GCTAAGCCGA TCCGGCAACG ATTCTCGGAA GCCATCGCGG AACGGCTGAT CGAGCTCGCC
TGGTGGGACT GGGATCACGC CGCGTTGCGC CGCGCGCTGC CGGATTTTCG CAATCTTGCG
ATCGAAGACT TTCTCGACAC GTATCAACAT CACGCCGGGG CGCCGGCGCA AGACAACAAC
GAGCGGAGCC AGCACGCATG A
 
Protein sequence
MDVLMADKNL SLVPCIAASA SVHDCTLGAY CEVGARTSLL EVAMGDYSYV VNDSQIAYAT 
IGKFCSIAAM TRINPGNHPM QRAAQAHFTY RASAYFDGEP DDAEFFAWRR QHHVTIGHDV
WIGHGAILLP GRNVGTGAVI AAGAVVTKDV APYSIVGGNP AKPIRQRFSE AIAERLIELA
WWDWDHAALR RALPDFRNLA IEDFLDTYQH HAGAPAQDNN ERSQHA