Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4433 |
Symbol | |
ID | 3970376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4941215 |
End bp | 4941895 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637927544 |
Product | putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) |
Protein accession | YP_534275 |
Protein GI | 90425905 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | [TIGR03308] phosphonate metabolim protein, transferase hexapeptide repeat family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTGC TGATGGCTGA CAAAAATCTC TCCTTGGTTC CTTGCATCGC CGCATCCGCC AGCGTGCACG ATTGCACGCT CGGCGCTTAT TGCGAGGTGG GCGCGCGCAC TTCGCTGCTG GAAGTGGCGA TGGGCGATTA CTCCTATGTC GTCAACGACA GCCAGATCGC CTATGCGACG ATCGGCAAGT TCTGCTCGAT CGCGGCGATG ACCCGGATCA ATCCCGGCAA TCACCCGATG CAGCGCGCTG CACAAGCACA TTTCACCTAC CGCGCCAGCG CTTACTTCGA CGGCGAGCCC GACGACGCTG AGTTCTTCGC GTGGCGGCGG CAGCATCACG TGACGATCGG CCACGATGTC TGGATCGGCC ATGGGGCGAT TCTGCTGCCG GGCCGCAACG TCGGCACAGG CGCGGTGATC GCGGCCGGCG CGGTGGTCAC CAAGGACGTC GCGCCCTACA GCATCGTCGG CGGCAATCCG GCTAAGCCGA TCCGGCAACG ATTCTCGGAA GCCATCGCGG AACGGCTGAT CGAGCTCGCC TGGTGGGACT GGGATCACGC CGCGTTGCGC CGCGCGCTGC CGGATTTTCG CAATCTTGCG ATCGAAGACT TTCTCGACAC GTATCAACAT CACGCCGGGG CGCCGGCGCA AGACAACAAC GAGCGGAGCC AGCACGCATG A
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Protein sequence | MDVLMADKNL SLVPCIAASA SVHDCTLGAY CEVGARTSLL EVAMGDYSYV VNDSQIAYAT IGKFCSIAAM TRINPGNHPM QRAAQAHFTY RASAYFDGEP DDAEFFAWRR QHHVTIGHDV WIGHGAILLP GRNVGTGAVI AAGAVVTKDV APYSIVGGNP AKPIRQRFSE AIAERLIELA WWDWDHAALR RALPDFRNLA IEDFLDTYQH HAGAPAQDNN ERSQHA
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