Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4421 |
Symbol | |
ID | 3970400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4928387 |
End bp | 4930105 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637927531 |
Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_534263 |
Protein GI | 90425893 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [T] Signal transduction mechanisms |
COG ID | [COG0492] Thioredoxin reductase [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTC AGCCCGCAGA GCCCGCAGAC GACAGCCCCC CGGACAATGC CTCGCGCTCG GCGATGCATC CGCGGCATGA ACAGACCTTC CCCAGCCTGA CGCCGGCCGA GATCGCCCGG ATCCGCCGGT TCGGCGAACT CCGGCGCTAT CACGATGGCG ACACGCTGTT CGAGACCGGC AAGACCGGCC CCGGCATGTT CGTCATCCTC GACGGTCACG TCGCCATCAC CCAGCGCGAC GGCCTTGGCC ATATCACCCC GGTGGTCGAG CAGGGCCCTG GGCAGTTCTT GGGCGAACTC GGGCAATTGT CCAACCGCTA CGCGCTGGTC GACGGCCATG CCGAGGGCGA GGTCGAATGC CTGCTGATCC CGCCGGAGCG GCTGCGCGCG CTGCTGGTGG CCGAAGCCGA CCTCGGCGAG CGCATCATGC GGGCGCTGAT CCTACGCCGC GTCAGCCTGA TCCAGGGCGG CGTCGGCGGC CCGGTGCTGA TCGGCGCGCC GAATTCCGGC GACCTGGTGC GGCTGCAGGG CTTCCTCACC CGCAACGGTT ATCCGCATCA CCTGCTCGAT CCGGCGCAGG ACAAGGACGC CGCCGATCTG GTGGCGCGCG CGGCGCCGCA GCCGTCCGAT CTGCCGCTGG TGGTGACGCC GGACGGCAGC ATCCTGCGCA ATCCCTCCGA GAGCGACGTC GCCCGCGCCA TGGGCATGCT GGGCGCCGTC AGCCCCGATA AATTGTACGA CGTGGCGATC GTCGGCAGCG GCCCCGCGGG GCTGTCGACC GCGGTCTATG CCGCCTCCGA GGGGCTGTCG GTGGCGGTGC TCGATGCGCG GGCGTTCGGC GGCCAGGCCG GCGCCAGCGC CCGGATCGAG AACTATCTCG GCTTCCCGAC CGGGATCTCC GGCCTGGCTT TGACCGCGCG GGCCTACAAC CAGGCGCAGA AATTCGGCGC CGAGATCATG ATCCCGGTGT CGGTGAAGAC ATTGCAATGC GGCTGCGACG ACGGCACCTT TGCGCTGACG CTGGACGACG GCGCGCCGTT GCGGGCGAAG TCGATCGTGG TGGCGAGCGG CGCCCGCTAT CGCCGGCCGC GGATCGACAA TCTCGACAAG TTCGAAGGCC GCGGCGTGTG GTACTGGGCC TCGCCGATCG AGGCCCGGCT GTGCAAGGAC CAGGAGGTGA TCCTGGTCGG CGGCGGCAAT TCCGCAGGGC AAGCCGCGGT GTTCCTGTCG GCGCATGCCA GCAAGGTGCA CATGGTGATC CGCGGCGGCG GGCTCGGCGC CAGCATGTCG CGCTATCTGA TCGAGCGGAT CGAATCGACG CCGAACATCG AGCTTCTGTT CAATACCGAG ATCGTGTCGC TCGAAGGCGC GGCCGACGCC ACGCTAGAGC GCGCGCAATT GCGCAGCCGG CTGTCCGGCG AGGCGAGCTG GAGCAATATC CGCAACGTGT TCCTGTTCGT CGGCGCCGAC CCCGCCACCG GCTGGCTCGA CGGCTGCGGC GTGGCGCTCG ACCGCGCCGG CTTCGTCATC ACCGGGGCGG CATACGAGCA GCGGCCGGCG ACGCCGCTGG AGACCTCGGT GCCCGGCGTA TTCGCGGTCG GCGACGTGCG CTCCGGCTCG GTCAAGCGGG TCGGTGGCGC GATCGGCGAG GGCGCCCAGG TGGTGGCGTC GCTGCACGGT TACCTCGCCG ACGCAACCGC GGCGGCACCG CCGGTATGA
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Protein sequence | MSLQPAEPAD DSPPDNASRS AMHPRHEQTF PSLTPAEIAR IRRFGELRRY HDGDTLFETG KTGPGMFVIL DGHVAITQRD GLGHITPVVE QGPGQFLGEL GQLSNRYALV DGHAEGEVEC LLIPPERLRA LLVAEADLGE RIMRALILRR VSLIQGGVGG PVLIGAPNSG DLVRLQGFLT RNGYPHHLLD PAQDKDAADL VARAAPQPSD LPLVVTPDGS ILRNPSESDV ARAMGMLGAV SPDKLYDVAI VGSGPAGLST AVYAASEGLS VAVLDARAFG GQAGASARIE NYLGFPTGIS GLALTARAYN QAQKFGAEIM IPVSVKTLQC GCDDGTFALT LDDGAPLRAK SIVVASGARY RRPRIDNLDK FEGRGVWYWA SPIEARLCKD QEVILVGGGN SAGQAAVFLS AHASKVHMVI RGGGLGASMS RYLIERIEST PNIELLFNTE IVSLEGAADA TLERAQLRSR LSGEASWSNI RNVFLFVGAD PATGWLDGCG VALDRAGFVI TGAAYEQRPA TPLETSVPGV FAVGDVRSGS VKRVGGAIGE GAQVVASLHG YLADATAAAP PV
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