| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4374 |
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| Symbol | |
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| ID | 3970428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4876320 |
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| End bp | 4879784 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637927483 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_534216 |
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| Protein GI | 90425846 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.95695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0465691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA CGCGCCTTCG CCTTCACGGT TTCAAGTCGT TCGTCGAGCC CACCGATTTC
CTGATCGAGC CGGGGTTGAC CGGCGTGGTC GGGCCGAACG GCTGCGGCAA ATCGAACTTG
GTCGAAGCGC TGCGTTGGGC GATGGGCGAG ACGTCGCATA AGTCGCTGCG CGCGGCCGAC
ATGGACGCGG TGATCTTTGC AGGCTCCGGC AACCGGCCGT CGCGCAACCA CGCCGAAGTG
GTGATGACGA TCGACAACAC CGACCGCACT GCGCCTGCGG CGATGAACGA TCAGGAAATC
CTCGAAGTAT CGCGCCGCAT CGAGCGCGAG GCCGGCTCGG TGTATCGCAT CAACGGCCGC
GATGTCCGCG CCCGCGACGT GCAGATCCTG TTCGCCGACG CCGCCACCGG CGCGCGCTCG
CCGGCCTTGG TGCACCAAGG CAAGATCGGC GAAATCATCC AGGCTAAGCC GGAGCAGCGC
CGGCGCGTGC TGGAAGACGC CGCCGGCGTC GCCGGGCTGC ACGCCCGCCG CCACGAGGCC
GAATTGCGGC TGAAGGCGGC GGAAACCAAC CTCACCCGCG TCGAGGACGT GATCGGGCAA
TTGTCCTCGC AGGTCGAAGG CCTGAAGAAG CAGGCGCGGC AGGCGATCCG CTTCAAGGAC
GTCGCGGCGA AAGTCCGCAA GGCCGAGGCC ACGCTGTTTC ACCTGCGCTG GCTCGACGCC
CACACCGAAG TGGCGGCCGC GGCGCAGACC CACGATCTCA ATGTGCGCGA GCACGCCGAG
CGCACCCGCG AGCAGGCCGA AGCCGCCCGC ATCCAGGCGA TCCGCGCTTC CGAATTGCCG
GCGCTGCGCG ATGCCGAAGC ACGCGCCGCC GCCGGGCTGC AGCGGCTCAC CAATGCCCGC
GAACAGCTCG ACCGCGAAGA GGTCCGCGCC AAGGAGCGCG CCGCCGAACT CGATCGCCGG
CTGTCGCAGT TCTCCTCCGA CGTCGCCCGC GAGCAGCAGC AGGCCTCCGA CGCCGTGGTG
GCGCTGGAGC GGCTCGCTAC CGAAGACGTC GAGCTGAAGG ACGAGATCAA GTCGCGGGTC
GAACAGCGCA GCGGCGTCGA CGAGCGCGTC GCCGAGGCCG AAGCCACGCT GGCCGCGGCC
GAGCGGGTAT TCGCCGAACT CACCACCGCG CTGGCCGATC TCACCGCGCG GCGCCGGCAG
TTCGAATCCG GCGTGCGCAC CCATCGCGAG CGCCTCGCCC GGCTCGACAA TGAAATCGGC
AATGTCGAGG CCGAGATTTC CAAGCTGACG CAGTTGACCG GCAGCCTCGG CGATCTGGAA
GCGCTGCAGG GCGCGGTCGA AGCGACGCTG GACGCGCTGG CGGAGTCCGA AGCGCTGGCG
CAGGCCTCGG AATCCGGCCA TGTCGCCGCC CGGCAGGCGC TGGAGGCTTC GCGCGGCCCG
CTCAGTGAGG CCGAGAAGAA AGTGCAGCGG CTGGAGACCG AAGCCCGCAC CATTTCCAAG
ATCCTCAACG GCGAATCCAA GAATCTGTGG CCGCCGATCA TCGACGGCGT CCACGTCGCC
AAGGGCTATG AGAAGGCGCT GGGCGCCGTG CTCGGCGACG ATCTCGATGC CCCGGTGGAT
GCCTCGGCGC CGATGCGCTG GAGCGATATC GGCGTGCAGG ACGGCGATCC GGAATTGCCG
GAAGGCGTCG AATCGCTGGC CGCCTTGGTC ACCGCGCCGC CCGAACTGGC GCGCCGGCTG
AAGCAGATCG GCGTGGTTTC CAAAGAGCGC GGCGCCGAAT TGGTGGCGCA GCTGAAGACC
GGGCAGCGGC TGGTGTCGCG CGACGGCGAC GTCTGGCGCT GGGACGGCTT CGTCGCCGCA
GCCCATGCGC CGACCGGCGC GGCGCGGCGG CTCGCGGAGC GCGCGCGGCT GACCGAAATC
GAAGCCGATC TCGAGCAGGC GCGCATTGAA GCCGCCGCCA AGCGCGAGGC GCTGGAGATC
GCCGAAGCGG CGCTGAAGGC CGCAGCCGCG ATGGAGAGCG AATCGCGCGA GACGCTGCGC
GCCACCCGGC GCGAGGTCGA CGGCGCGCGC GAGCGCCACG CCGCCACCGA ACGCGAGATC
AACCGCCACG CCGCGCGGCG CTCGGCCTTG ACCGAAGCGC AGTCGCGGCT TGCCGCCGAC
CGCGCCGAGG CCGAAGCCGC GATGTACACC GCGGAGGAAA CGCTCGCCGA ACTGCCGCCG
ACCAGCGACA CCGAGCAGCA GCTCGCCGCG GTGCGCAGCG AGATCGAAGG CCACCGCCGC
TTGGCCGCGC AGGTCCGCGC CGAAGCGAGT GCGTTGGCGC GCGAAGCCGA ACTCGCCGAC
AAGCGGCTGC AGGCGATCGT CGCCGAGCGC GCCGAATGGC AGCGCCGCAG CGAGGGCGCC
GCCTCGCAAA TCGCCACCAT CGAATCCCGG CTCACCGAAC TCACCGAAGA GCGCGCCGAG
CTCGACAACG CCCCGGCGGC GTTCGCGCAG CAGCGCAGCG CGCTGATCAG CGAAATCCAA
TTCGCCGAAA CCGACCGCCG CGTCGCCGCC GACGCGCTGG CCACCGCCGA AACCGCGATG
GCCGAGACCG ACCGCGACGC GAAGTCGTCG CTGGAAGCGC TGTCCAGCGC CCGCGAAGCG
GTGGCGCGCG CCGAGGAGCG GATGGAGGGC GCGCGGCGAC GGCTCGACGA CATCGAGCGC
GAGATCCGCG ACATGCTTGA AGTCGAGCCG CACGCGGTCG GCGGGCTCGC CGAGATCACC
CCGGACACCC AGCTTCCGCC ACAGCACGAG GTCGAGGCCG AACTCGACAA GCTGCGCCGC
GACCGCGAAC GGCTCGGCGC GGTCAATCTG CGCGCCGACG AGGAATTGCG CGAGGTCGAG
ACCCAGCACG GCTCGCTCGC CACCGAGCGC GACGACTTGG TCGAAGCGAT CAAAAAGCTG
CGCACCGGCA TCCAGAGCCT CAACAAGGAA GCCCGCGAGC GGCTGCTGAC CTCGTTCGAG
ACCGTCAACA GCCATTTCAA GCGATTGTTC GTGGTGCTGT TCGGCGGCGG CGAGGCCGAA
TTGAAGCTGG TCGAGAGCGA CGATCCGCTG GAAGCCGGGC TCGAGATCGT CGCCAAGCCG
CCCGGCAAGA AGCCGCAGAC GCTGTCGCTG TTGTCCGGCG GCGAACAGGC CTTGACCGCG
CTGTCGCTGA TCTTCGCGGT GTTCCTCACC AACCCGTCGC CGATCTGCGT GCTCGACGAA
GTCGACGCGC CGCTCGACGA CCACAACGTC GAACGGTTCT GCGACCTGTT GAACGAGATG
ACCTCGACCA CCGAGACCCG CTTCATCGTC ATCACCCATA ACCCGATCAC CATGGCGCGG
ATGAACCGGC TGTTCGGCGT CACCATGGCG GAGCGCGGCG TCTCGCAGCT GGTCTCGGTC
GGGCTCGAGG CCGCGGTGAA AATCCTCGAT CAGAACGTGG CGTGA
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| Protein sequence | MKLTRLRLHG FKSFVEPTDF LIEPGLTGVV GPNGCGKSNL VEALRWAMGE TSHKSLRAAD
MDAVIFAGSG NRPSRNHAEV VMTIDNTDRT APAAMNDQEI LEVSRRIERE AGSVYRINGR
DVRARDVQIL FADAATGARS PALVHQGKIG EIIQAKPEQR RRVLEDAAGV AGLHARRHEA
ELRLKAAETN LTRVEDVIGQ LSSQVEGLKK QARQAIRFKD VAAKVRKAEA TLFHLRWLDA
HTEVAAAAQT HDLNVREHAE RTREQAEAAR IQAIRASELP ALRDAEARAA AGLQRLTNAR
EQLDREEVRA KERAAELDRR LSQFSSDVAR EQQQASDAVV ALERLATEDV ELKDEIKSRV
EQRSGVDERV AEAEATLAAA ERVFAELTTA LADLTARRRQ FESGVRTHRE RLARLDNEIG
NVEAEISKLT QLTGSLGDLE ALQGAVEATL DALAESEALA QASESGHVAA RQALEASRGP
LSEAEKKVQR LETEARTISK ILNGESKNLW PPIIDGVHVA KGYEKALGAV LGDDLDAPVD
ASAPMRWSDI GVQDGDPELP EGVESLAALV TAPPELARRL KQIGVVSKER GAELVAQLKT
GQRLVSRDGD VWRWDGFVAA AHAPTGAARR LAERARLTEI EADLEQARIE AAAKREALEI
AEAALKAAAA MESESRETLR ATRREVDGAR ERHAATEREI NRHAARRSAL TEAQSRLAAD
RAEAEAAMYT AEETLAELPP TSDTEQQLAA VRSEIEGHRR LAAQVRAEAS ALAREAELAD
KRLQAIVAER AEWQRRSEGA ASQIATIESR LTELTEERAE LDNAPAAFAQ QRSALISEIQ
FAETDRRVAA DALATAETAM AETDRDAKSS LEALSSAREA VARAEERMEG ARRRLDDIER
EIRDMLEVEP HAVGGLAEIT PDTQLPPQHE VEAELDKLRR DRERLGAVNL RADEELREVE
TQHGSLATER DDLVEAIKKL RTGIQSLNKE ARERLLTSFE TVNSHFKRLF VVLFGGGEAE
LKLVESDDPL EAGLEIVAKP PGKKPQTLSL LSGGEQALTA LSLIFAVFLT NPSPICVLDE
VDAPLDDHNV ERFCDLLNEM TSTTETRFIV ITHNPITMAR MNRLFGVTMA ERGVSQLVSV
GLEAAVKILD QNVA
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