| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4351 |
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| Symbol | |
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| ID | 3971231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4851985 |
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| End bp | 4852893 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927460 |
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| Product | peptidase S49 |
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| Protein accession | YP_534193 |
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| Protein GI | 90425823 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.244861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00437217 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAGC AGACGGCTGA ACATCGGGCG AGTGCGGGCG CGTTGCAGGG ACTGCTGGGC
TGGCTGCCGG AGCGTTGGCG GCCCGGTCAA GTCGTGGTGC CGGTGGTGCG GCTATCCGGT
GTGATCGGCG CGGTGACGCC GCTGCGCCCG GGGTTGTCGC TGGCTGGCAC GGCCAAGATG
CTGGATCGCG CTTTCGCCAC CCGCAATGCC AAGGCGGTGG CGCTGGCGAT CAATTCGCCG
GGTGGCTCGC CGGTGCAGTC GCGGCAGATC TATCTGCGAA TCCGCCAGCT CGCCGCCGAG
AAGAAGCTGC CGGTGATCGC CTTCGTCGAA GACGTCGCGG CCTCGGGCGG CTACATGCTG
GCTTGCGCGG CCGACGAGAT CTACGTCGAT CCGTCGTCGA TCGTCGGCTC GATCGGCGTG
GTCGGCGGCA CCTTCGGTTT TCCGGAACTG TTGAAAAAGA TCGGCGTCGA GCGGCGGCTC
TACACCGCGG GCGAACACAA GGCGCAGCTC GATCCGTTCC TGCCGGAGGA TCCCGAGGAT
GTCGCCAGGG TCAAGGCGCT GCAGCGCGAG ATCCACGCCA TGTTCATCTC GTTGGTCAAG
GACAGCCGCG GCGCCAAGCT GAAAGGCGCC GAGGATCTGC TGTTCTCCGG CGAATATTGG
GCCGGCGGCA CCTCGGTGAC GCTGGGCTTA AGCGACGGCA TCGGCGATCT GCGCGGCACC
CTGCGGGCGC GGTTCGGCGA CAAGGTCCGC ACCCCGGTGA TCGCGCCGGC CTCCGGCATG
TTGGCCGGGC TGTTCGGCCG CCGCTCGGCG GCAACTTCGC TCGGCCCGTT CGATGCCGTG
GCGGAGTGGC CGGATCAGTT GATTTCGGCG CTGGAAGCCC GCGCCGTATG GGCCAAATAC
GGCTTTTGA
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| Protein sequence | MSEQTAEHRA SAGALQGLLG WLPERWRPGQ VVVPVVRLSG VIGAVTPLRP GLSLAGTAKM
LDRAFATRNA KAVALAINSP GGSPVQSRQI YLRIRQLAAE KKLPVIAFVE DVAASGGYML
ACAADEIYVD PSSIVGSIGV VGGTFGFPEL LKKIGVERRL YTAGEHKAQL DPFLPEDPED
VARVKALQRE IHAMFISLVK DSRGAKLKGA EDLLFSGEYW AGGTSVTLGL SDGIGDLRGT
LRARFGDKVR TPVIAPASGM LAGLFGRRSA ATSLGPFDAV AEWPDQLISA LEARAVWAKY
GF
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