| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4280 |
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| Symbol | |
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| ID | 3971560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4777699 |
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| End bp | 4778367 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927389 |
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| Product | methionine biosynthesis MetW |
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| Protein accession | YP_534123 |
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| Protein GI | 90425753 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02081] methionine biosynthesis protein MetW |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.558319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.118746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGCTC AGGAATCCTT GCCCTTCATC ACGCCGGAAC CCGTGCATCC GCTGAAATGC
TATCGCGCCG ACCATGTGCT GGTCGCCGAG ATGGTGGAAA CCGGCTCCAA GGTGCTCGAC
GTCGGCTGCG GCGAGGGCGA TCTGCTGCAG CTGTTGGAAA GCCGCGGCAT CGACGGCCGC
GGCATCGAAT TGTCGCGCGA GGGCGTCAAC CGCTGCGTGT CGCGCGGGCT CGCGGTGGTG
CAAGGCGACG CCGACACCGA CCTCGTCAAC TATCCCAACG ACGCCTTCGA CTATGTGATC
CTGTCGCAGA CCCTGCAGGC GACGCGGCAG CCGCGCGCCG TGCTGGAAAA CCTGCTGCGG
ATCGGCCGCC GCGCCATCGT GTCGTTTCCG AATTTCGGCT ACCTCAACAT GCGGCTGCAA
CTGTTGATCC ACGGCCAGAT GCCGCGCACC GAGAATCTGC CGGCGACCTG GTACGACACC
CCGAACATCC ACTTCTGCAC CATCAAGGAT TTCGTGCTGC TGTGCGACGA GATCAACGTC
AAGATGGAAC GCGCGGTGGC GCTCGACCAG CACGGCCGTC CGCTGCGGCT GAATGCGCCG
TGGTGGTTCT GGAACCTGTT CGGCGAGCAG GGCGTGTTCC TGCTGAGCCG CGCGGAGAAG
ACCAAGTAA
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| Protein sequence | MSAQESLPFI TPEPVHPLKC YRADHVLVAE MVETGSKVLD VGCGEGDLLQ LLESRGIDGR
GIELSREGVN RCVSRGLAVV QGDADTDLVN YPNDAFDYVI LSQTLQATRQ PRAVLENLLR
IGRRAIVSFP NFGYLNMRLQ LLIHGQMPRT ENLPATWYDT PNIHFCTIKD FVLLCDEINV
KMERAVALDQ HGRPLRLNAP WWFWNLFGEQ GVFLLSRAEK TK
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