Gene RPC_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4251 
Symbol 
ID3971593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4732235 
End bp4732822 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID637927354 
Producthypothetical protein 
Protein accessionYP_534094 
Protein GI90425724 
COG category[S] Function unknown 
COG ID[COG5400] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.173324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.664852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCG CATCACGCCT CGCCGCGGTG ACGCTCGCCG CGATGATGTC CTGGATTGTG 
CCGGCATCGG CGCAGCAGGC GCCGCGGCAG CAGCAGGCCA CGCCGAACAC CTATGGCCCG
GACGAATTGA CCAACGCCGG CCACCGCTTC TTCGGCAATG TCTCGCGCGG CCTCGCCTCG
GTGATCGAGC GGGCGGTCAG CCAATGGGGC CTGCCGAACG GCTATATTCT GGGCGAAGAA
GGCTCCGGCG CCTTCGTGGC CGGGCTGCGC TACGGCGAGG GCACGCTCTA CACCAAGAAT
GCCGGCGATC TGCGGGTATA TTGGCAGGGT CCCTCGGTCG GCTTCGATTG GGGCGGCGAC
GGCGCGCGGA CCATGACGCT GGTGTACAAT CTGCCGGCCA CCAATGCGAT CTATCAGCGC
TTCGCCGGGA TCGACGGCTC GGCCTACATC GTCGGCGGCT TCGGCATGAC GGCGCTCACC
GCCAACAACA TCGTGCTGGT GCCGATCCGC TCCGGCCTCG GGCTGCGGCT GGGCGCCAAT
ATCGGCTACC TCAAGTTCAC CCAGGGCGCG ACCTGGAATC CTTTCTGA
 
Protein sequence
MTFASRLAAV TLAAMMSWIV PASAQQAPRQ QQATPNTYGP DELTNAGHRF FGNVSRGLAS 
VIERAVSQWG LPNGYILGEE GSGAFVAGLR YGEGTLYTKN AGDLRVYWQG PSVGFDWGGD
GARTMTLVYN LPATNAIYQR FAGIDGSAYI VGGFGMTALT ANNIVLVPIR SGLGLRLGAN
IGYLKFTQGA TWNPF