Gene RPC_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4240 
Symbol 
ID3971582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4721641 
End bp4722792 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content67% 
IMG OID637927343 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_534083 
Protein GI90425713 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.163425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGACC CCCTTCACAC CGAACTCGGC GCTGCAAAAG CCTGGATCGT CGACAAGGCG 
CTGCCGTTCT GGTCGCGCAC CGGCTTCGAT CGCAACATCG AGCTGTTTGT CGAGCGGGTC
GACTTTTCCG CGCAGCCGAT CGACGTCCCG CAGCGGCTGA TGGTGCAGTC GCGGCAGATC
TATGTGTTTA GCCATGCGAC GCAGCTCGGC TGGTTCGACG GCCGCGAACT GGTCGACACC
GCGCTGCGCT CCGTCCTCAA GAAATATGCA ACCGGACAGC CACGCGCTCC GATGGCGTTC
TCGGTCGATC GCCGCGGCAA CCTCGTCGAG ACGTTCGCCG ACACCTACAG CTACGCGTTC
CTGTTGCTGG CGCTGTCGTT TGTCCGCAAG CTCGGCGACT GCGGTGCGGC TGATGCAGCG
GCCGCGGAGA TGATCGCGTT GTTGCGCTCC GATCTGGCGC ATCCCTGCGG ATTGGGATTC
CTCGATCGCC TGCCGCGGCG CGATGCCTAC TCCCGGCAGA ATCCGCAGAT GCATCTGCTG
GAAGCGGCCC TTGAGGCCGC GAGCGCCTTC GACAACGCCG AGGCGCGCCG GATCTGCGAC
CAGATCGTCG CGCTGTTCGA GAGCAAAATG TTCTCGCGGC AGCACCGCGC GCTCGCCGAG
CTCTACGACG ACAACTGGCA GATCGCCGAC CTACCGCGGG CCAGCTTCGA GCCGGGCCAC
CATTTCGAAT GGATCTGGCT GCTCGACCGC TTCTCGCGCG CGACCGGTCG CGCCACCGAA
GCGCTGATCG GCGAGCTGTC GCAACGCGCC TACGCCGAGG GCATCGGCGG ATCGGGCGCG
ATCGTCGAAT CGATTGCGAT CGAAGGCACG GCGCGGGTCG AAAGCCGGCG CTGCTGGGCG
ACCTGCGAAG CGCTGAAGGC GGTCGCCAGC GATTTCGAAT TCGGCCGCGA CCGCGCGCTG
TCGAAAAGCC GCGCCGCCGC GCTGCTGCGG GCGCTGCGGG TCTGTTTCCT GTCGGGGCCG
TTCGACGGCG GATGGATCGA CCGCATCGAC GGCGACGGCC GGCCGATGCT GGACTACGTG
CCGGCCTCGA CGCTGTACCA CGTGTTTGTC GCGATCGCCG AAGCCGACCG GGTGTTCGGC
GGCGCGGACT GA
 
Protein sequence
MPDPLHTELG AAKAWIVDKA LPFWSRTGFD RNIELFVERV DFSAQPIDVP QRLMVQSRQI 
YVFSHATQLG WFDGRELVDT ALRSVLKKYA TGQPRAPMAF SVDRRGNLVE TFADTYSYAF
LLLALSFVRK LGDCGAADAA AAEMIALLRS DLAHPCGLGF LDRLPRRDAY SRQNPQMHLL
EAALEAASAF DNAEARRICD QIVALFESKM FSRQHRALAE LYDDNWQIAD LPRASFEPGH
HFEWIWLLDR FSRATGRATE ALIGELSQRA YAEGIGGSGA IVESIAIEGT ARVESRRCWA
TCEALKAVAS DFEFGRDRAL SKSRAAALLR ALRVCFLSGP FDGGWIDRID GDGRPMLDYV
PASTLYHVFV AIAEADRVFG GAD