Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4177 |
Symbol | |
ID | 3972320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4641628 |
End bp | 4642521 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637927280 |
Product | inner-membrane translocator |
Protein accession | YP_534021 |
Protein GI | 90425651 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCC AGCTCCTAAT CCAGCTTCTG GTCAACGGCC TGGTGGTCGG TACGCTGTAC GGCGTGGTGG CGATGAGTTT CGTGCTGATC TACAAAGCCA CGCAGGTCGT CAACTTCGCG CAGGGCGAAT TGCTGCTGAT CGGCGCCTGG GTGTGCTGGA CGCTGCTGAC CAAATACCAG GTGCCGTTCT ATCTCGGCAT GCCGATCACG CTGGCCTTCA TGTTCTGCTT CGGCATCGCG GTGCAGATCG TGGTGCTGCG GCCGATGATC GGCGAGCCGA TCATCTCGGT GATCATGGTG ACGATCGCGC TGTCGACCGT GTTCCAGGCC GCGCTGAAAT GGATTTTTGG CGTCAGCCCG CAGCCGTTTC CGCGGGTGTT CGAGAGCCAG TCGGTGTCGT TCGCCGGACT GCAGATCCAG ACCGTCTATG TCATGAGCCT GGTGGTCTCG GTGGCGATGA TGATCGGCAT GGCGTGGTTC TTCAAGGTCT CCAAATATGG TCTAGCGATG CGCGCCACCG CGTTCAACCA GCAGGTCGCG CAGTCGCTCG GCATCTCGGT GAAAAGCGTG TTCGCGATGG CCTGGGCGAT CTCGGCCACC GTCTCGGCGG TCGCCGGCGT CGTGGTGGCG GTGGTCAACG GCGTGTCGTC GGGGCTCTCC ACCTACGGCA TCAAGGTGTT TCCCGCGGCG ATTCTCGGCG GGCTGGATTC GATCGGCGGC GCCGTGGTCG GCGGCCTGAT CATCGGGCTC CTCGAGAACG TCGCCCAATA TGTCGACAGC GAATATCTGC ACTGGGGCAA TCTCTACGAG GTGGCGCCGT TCTACGTGCT GATCATCATC CTGATGATCA AGCCCTATGG GCTGTTCGGC ACCAAAGACA TCGAACGGAT CTGA
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Protein sequence | MNSQLLIQLL VNGLVVGTLY GVVAMSFVLI YKATQVVNFA QGELLLIGAW VCWTLLTKYQ VPFYLGMPIT LAFMFCFGIA VQIVVLRPMI GEPIISVIMV TIALSTVFQA ALKWIFGVSP QPFPRVFESQ SVSFAGLQIQ TVYVMSLVVS VAMMIGMAWF FKVSKYGLAM RATAFNQQVA QSLGISVKSV FAMAWAISAT VSAVAGVVVA VVNGVSSGLS TYGIKVFPAA ILGGLDSIGG AVVGGLIIGL LENVAQYVDS EYLHWGNLYE VAPFYVLIII LMIKPYGLFG TKDIERI
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