| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4099 |
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| Symbol | |
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| ID | 3973188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4554470 |
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| End bp | 4556137 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927203 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_533944 |
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| Protein GI | 90425574 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTT GGACGCGCAG CTCCGACGCG GAGAGTGCTG CACAGATGCA AGCCATCAGC
CGGTCGCAGG GCGTGATCGA GTTCGCCATT GACGGCACCA TTCTCACCGC CAACCAGAAT
TTTCTCGACG CGCTCGGCTA CAGCCTGGCC GAGATCAAGG GCAAGCATCA CCGGATGTTC
GTCGATCCCG ACGAGCGCGA CGGCGCCGCC TACCGCGCGT TCTGGGCGAG CCTTGGCCGC
GGCGAATACC AGGCCGCCGA ATACAAGCGG ATCGGCAAGG GCGACCGCGA GGTCTGGATC
CAGGCCAGCT ACAATCCGAT CATGGATCGC AGCGGCAAGC CGGCCAAAGT CATCAAGTTC
GCCACCGACG TCACCGCGCG CAAGATCCGC GGCATGGAAG ACGCCGGCAA GATCGCCGCG
ATCCTGCGGG CGCAGGCGGT GATCGAGTTC AATCTCGACG GCACCATCAT CACCGCCAAC
GACAATTTCC TCGGCGTGAT GGGCTACGCG TTGGCCGATG TCGTCGGCAA GCCGCACAGC
ATGTTCGTCG AGCCGGCGGA GCGCGACAGC GCCGCGTATC GTGCGTTCTG GGCCGGGCTC
AATCGCGGCG AATATCTCGC CGCGGAGTTC AAGCGGATCG GCAAGGGTGG CCGCGAGGTC
TGGATCCTGG CGTCCTACAA CCCGATCATC GACGAGAAGG GCAAGGTCTT CAAGGTGGTC
AAATTCGCCA CCGAGGTGAC CCAGCAAAAG CTGCGCTTCA CCGAACTCGA CGGCCAGGTG
CAAGCGATCG GCAAGTCGCA GGCGGTGATC GAATTCGCCA TGGACGGCAC CATTCTCGGC
GCCAACGGCA ATTTTCTCGA CGCGATGGGC TATTCGCTGG CCGAGATCAA GGGCCGTCAC
CACAGCATGT TCGTCGACCC CTCGGAGCGC GACGGCGCCG CCTACCGGGC GTTCTGGGCC
ACGCTCAATC GCGGCGAGTT CCAGGCCGCC GAATACAAGC GGATCGGCAA GGGCGGCCGC
GAGGTCTGGA TCCAGGCCAC CTACAATCCG ATTCTCGATC TCAACGGCAA GCCGTTCAAG
ATCGTCAAAT ACGCCAGCGA CACCACCGCC CGGGTGATCG CACGGATCAA GAGCGACCGG
GTCAGCAGGA TGCTGGAGTC GGTGGCGGAC GGCGCCGAGA AGTTGAACGC CTCGGTGCGC
GACATCGCCG AGGCGATGAC CAAATCGAAG TCCACCGCGA TCGCGGCGGT CACCAAGGTG
GAGTCGGCCG ATCAGCAGAC CCAAAGGCTG GCCGTGGCGG CGCAGTCGAT GGGCGGCATC
GTCGAACTGA TCGGCAACAT CACCGGCCAG ATCAACCTAT TGGCGCTCAA CGCCACGATC
GAATCGGCGC GCGCCGGCGA GGCCGGCCGC GGCTTTGCGG TGGTCGCCTC CGAGGTGAAG
AATCTCGCCA ACCAGGCCAC CGACAAGATC GGCAGCGAAA TCTCCGGGCT GAACGGCATC
TCCGCCGACG TGGTCGCGGC GTTGCTGGCG ATCAAGCAGG AAATCCAGAG CGTCAGCGAA
TTCGTCACCG CCACCGCCGC CGCGGTCGAG CAGCAGAGCG AGGTGACGGC CGAGATGTCA
TCGAGCATGC AGCAGGCCGC CGCCGAGGCC GCCAGCATCG GGCATTAG
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| Protein sequence | MAFWTRSSDA ESAAQMQAIS RSQGVIEFAI DGTILTANQN FLDALGYSLA EIKGKHHRMF
VDPDERDGAA YRAFWASLGR GEYQAAEYKR IGKGDREVWI QASYNPIMDR SGKPAKVIKF
ATDVTARKIR GMEDAGKIAA ILRAQAVIEF NLDGTIITAN DNFLGVMGYA LADVVGKPHS
MFVEPAERDS AAYRAFWAGL NRGEYLAAEF KRIGKGGREV WILASYNPII DEKGKVFKVV
KFATEVTQQK LRFTELDGQV QAIGKSQAVI EFAMDGTILG ANGNFLDAMG YSLAEIKGRH
HSMFVDPSER DGAAYRAFWA TLNRGEFQAA EYKRIGKGGR EVWIQATYNP ILDLNGKPFK
IVKYASDTTA RVIARIKSDR VSRMLESVAD GAEKLNASVR DIAEAMTKSK STAIAAVTKV
ESADQQTQRL AVAAQSMGGI VELIGNITGQ INLLALNATI ESARAGEAGR GFAVVASEVK
NLANQATDKI GSEISGLNGI SADVVAALLA IKQEIQSVSE FVTATAAAVE QQSEVTAEMS
SSMQQAAAEA ASIGH
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