Gene RPC_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4097 
Symbol 
ID3973186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4550658 
End bp4551590 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content67% 
IMG OID637927201 
Producthypothetical protein 
Protein accessionYP_533942 
Protein GI90425572 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.913855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCT TGCCTCCGCC CGCCCCGCAC CACCGTTTCG CGTGGCTGTC CGATCAGCCC 
TATCTGCTGC TCAGCCTGAC CTCGCTGTTC TGGGCCGGCA ACGCCATCGT CGGCCGCGCC
GCGGCCGGGC ATTTCCCGCC GGTGACGCTG TCGTTCCTGC GCTGGGCGGT GGCGTTCCTG
CTGGTGCTGC CGTTCGCCTG GCCGCATCTG AAGCGCGACT GGCACGAGAT CCGGCGCCGG
CTCGGCGTGA TGATCGCGAT CTCGGTGGCC GGCATCTCGA CCTTCAACAC GCTGCAATAC
ACCGCGCTGG AATACACCAC GGCGCTGAAC GCGCTGCTGC TGCAATCCAC CGCGCCGCTG
TTCGTGGCGA TCTGGTCGCT GATCGTTCTC GGCATCCGGC TGACGCTGGC GCAGGCGCTC
GGCGTGCTGG TGTCGATGCT CGGCGTGGCG GTGATCCTGC TGCACGGCGA CCTCGGCCAG
CTCGCCCACA TCGACCTCAA CCGCGGCGAT CTGATCTTCA TCACCGCGAT GGCGATCTTC
GGGTTGTATT CGGCGCTGTC GCAGAAGCGC CCGGCGATCC ATGGCCTGTC GTTCCTGGCC
TTCACCTTCG GCTGTGGCGC GCTCGGCCTC GTGCCGTTGC TGATCGTGGA ACTGATGCTG
CGGCCGCCGC CGGAGCTGAC GCTCGGCAAC TTCGCCTCGC TCGGCTATGT CGCGGTGTTT
CCCTCGATCC TGGCTTATCT CTGCTACAAC CGCGGCATCC AATTGATCGG CGCCAACCGC
GCCGCGCCGT TCTTTCACCT GATCCCGGTG TTCGGCTCGG CGATGGCGAT CGGCTTTCTC
GGCGAACGGC CGCAGCTGTA TCACGCCTTC GGCTACGCCT TGGTGCTGGC GGGGGTGTAT
GTGGCGGCAA GGAAGCAGAA GGCGGCGGAA TAA
 
Protein sequence
MTPLPPPAPH HRFAWLSDQP YLLLSLTSLF WAGNAIVGRA AAGHFPPVTL SFLRWAVAFL 
LVLPFAWPHL KRDWHEIRRR LGVMIAISVA GISTFNTLQY TALEYTTALN ALLLQSTAPL
FVAIWSLIVL GIRLTLAQAL GVLVSMLGVA VILLHGDLGQ LAHIDLNRGD LIFITAMAIF
GLYSALSQKR PAIHGLSFLA FTFGCGALGL VPLLIVELML RPPPELTLGN FASLGYVAVF
PSILAYLCYN RGIQLIGANR AAPFFHLIPV FGSAMAIGFL GERPQLYHAF GYALVLAGVY
VAARKQKAAE