| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4073 |
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| Symbol | |
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| ID | 3973354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4525515 |
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| End bp | 4526945 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927177 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_533918 |
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| Protein GI | 90425548 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGT TGAAGTTGTT GGCCCTGCTC GCGGGGCTGT CCGCTTGCGC GCTCACGCCA
CGCGCGGCGC AAGCCGAAGC GCTGCTGCTG ATCGAAGCCG ATACCGGCAA GGTGCTGCAG
GCTGAGAACG CCACCTATCC GTGGTATCCG GCCTCGGTGA CCAAGCTGAT GACCGCCTAT
GTCACGCTGA AGGCGATCAA GGAAGGGCGC ATCACGCTCG ACACGCTGCT GACGGTATCG
CCGACCGCGG CCTCGCAGTC GCCCTCGAAG ATGGGATTTC GCGCCGGCAC CCAGCTCACC
GTCGACAACG CCTTGAAGAT GATGCTGGTG AAGTCGGCCA ACGACATGGC TGTGGTGCTC
GCCGAAGGCG TCGGCGGTTC GATCGACGGC TTTTCGGCGA TGATGAACGA CAACGCGCAG
CGGCTCGGCA TGACCCAGAC CTCCTACGTC AATCCCAACG GATTGCCGGC CGACGGCCAG
ATCACCTCGG CGCGCGATCT CGGCATTCTC GCCCGCGCCA TCATCCGCGA CCTGCCGGAA
TACGAGTATT TCGTCCATAT CCCGTCGATC CGTTTCGGCA AACGGGTGAC GCAGAATTTC
AACCGGCTGA TCGGCCGCTA TCCCGGCGCC GACGGCTTCA AGACCGGCTT CATCTGCGCC
TCCGGCTTCA ACCTGGTGGC GTCGGCGACC CGCGACGGCA AGCGGCTGAT CGCGGTGGTG
CTCGGCGCGC CGTCGTCGCA GGCCCGCGCG CTGAAAGCCG CGCAATTGCT GGAGCGCGGG
TTTTCCGCCA ACCAGCTGAC CTGGCTGCGC CCGGCGCTCG GCACCGTCGA CAACCTGGCG
CCGATCGACG CCGCACCGCC GAATTTGCGC GACGAGATGT GCGGGCCGAA ACGCAAGCGC
CCGGCCAGCG ATGAATCCGA GGAAGACAAC ATCGCCAGCG CGACCGGCGA GAGCGCCATG
AGCTTCTTCA GCGCCGGGCT GCAGCCGCCG GCCTTGCGGC CGGTGGATAT GCTCGCCGCA
GCCCCCGCAC CGTCCGAGCC GATCGTGGTT TATACCGGGC CGAAGAAGAC CGGCGCCGAA
CTGATCGCCG CGGTCGCGGT CGAGGCGCAG AAGCAAACCC CGAAGCCGCG CGGCAAGAAA
ACCCTCGCCG CCAAGAAGCC GGATGGCGCC GCCGACGCCA AGGACAGCAA ATCAGCCGGT
TCGGACGGCC GGGTGTCGCT GACCATCGAT CCGAAAGCTG CGCCGAAGCC GGCGCATGCC
GGCAAGCAGG TCCACGCCAA ACCTGACGCG GCGGCGGTGA AGCCCGCCGA GAAGCCCGCC
GCCTCGGCGA CAGCCAAACC GGCCGCCAAG GATAAGCCGA AGGCGGCCAG CAAACCGACG
CCGAAGGCGA ATACCACCGG CGACGCCAAG CCAGCCGACC CGAAGACCTA A
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| Protein sequence | MPSLKLLALL AGLSACALTP RAAQAEALLL IEADTGKVLQ AENATYPWYP ASVTKLMTAY
VTLKAIKEGR ITLDTLLTVS PTAASQSPSK MGFRAGTQLT VDNALKMMLV KSANDMAVVL
AEGVGGSIDG FSAMMNDNAQ RLGMTQTSYV NPNGLPADGQ ITSARDLGIL ARAIIRDLPE
YEYFVHIPSI RFGKRVTQNF NRLIGRYPGA DGFKTGFICA SGFNLVASAT RDGKRLIAVV
LGAPSSQARA LKAAQLLERG FSANQLTWLR PALGTVDNLA PIDAAPPNLR DEMCGPKRKR
PASDESEEDN IASATGESAM SFFSAGLQPP ALRPVDMLAA APAPSEPIVV YTGPKKTGAE
LIAAVAVEAQ KQTPKPRGKK TLAAKKPDGA ADAKDSKSAG SDGRVSLTID PKAAPKPAHA
GKQVHAKPDA AAVKPAEKPA ASATAKPAAK DKPKAASKPT PKANTTGDAK PADPKT
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