Gene RPC_4051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4051 
Symbol 
ID3969300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4501577 
End bp4502305 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content63% 
IMG OID637927155 
Productsignal-transduction protein 
Protein accessionYP_533896 
Protein GI90425526 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGC ATCAGATTAT GACCCGGCAA GTGGTCACCG TGAGCCCTGA CGCTTCGATC 
GTCGATGCCG CCAACATCAT GCTGTCGCAG CACGTCAGCG GACTGCCCGT GGTCAACGCA
GCCGGCGAAC TGATCGGTAT CATCTCGGAG GGCGATTTTA TCCGTCGCGC CGAAATCGGC
ACCGAACGCA AGCGCGGCCG TTGGCTGCGG CTGTTGCTCG GCCCCGGCCA ATCGGCGTCC
GATTTCGTTC ACGAGCACGG CCGCAAGGTC GGCGAGATCA TGACCACGCA TCCGCACACC
GTGAATGCCG AAGCCACCGT CGCCGAGATC GTCAAGGCGA TGGAGAAACA CCACGTCAAA
CGCTTGCCGG TGATGCAGGA CGGCCGGATG GTCGGAATCG TCACCCGCAA GAACTTGCTG
CAGGCGGTGG CCAATTTGGC GCGCGACGTG CCTGCGCCGA GCGAGGCCGA CGACAAGATC
CGAGGCCGCG TCACCGCCGC GATCGAGCAC AATGATTGGC GGCCGTTCGG GCTCAGCGTC
ATCGTCCGCG ACGGTGTGGT CCATCTCAGC GGCGTGATCA CCGAGGAACG CTCCCGCAAG
GCGGCGATCG TGGCCGCCGA GAATGTCTGC GGGGTCAAGG AGGTCCACGA TCACCTGTGT
TGGGTCGACA CGATGTCCGG ATTCTACCTG AACTCCCCGG AAGACGACCA GATGTCGAAA
GCGATCTGA
 
Protein sequence
MRAHQIMTRQ VVTVSPDASI VDAANIMLSQ HVSGLPVVNA AGELIGIISE GDFIRRAEIG 
TERKRGRWLR LLLGPGQSAS DFVHEHGRKV GEIMTTHPHT VNAEATVAEI VKAMEKHHVK
RLPVMQDGRM VGIVTRKNLL QAVANLARDV PAPSEADDKI RGRVTAAIEH NDWRPFGLSV
IVRDGVVHLS GVITEERSRK AAIVAAENVC GVKEVHDHLC WVDTMSGFYL NSPEDDQMSK
AI