| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4028 |
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| Symbol | |
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| ID | 3969412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4477578 |
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| End bp | 4478384 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637927132 |
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| Product | two-component response regulator |
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| Protein accession | YP_533873 |
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| Protein GI | 90425503 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.215518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGAT CACAGCTTGT TGCTGAACAT TTGCCGTTGT TGCGCCGCTA TGCCCGAGCT
TTGACCGGCA ACCAGGCTTC TGGCGATGCC TATGTCGGAG CGATGCTGGA GGCGTTGCTA
CAAGATCAGA ACCTGCTCGA CGAACAGCAC GGCGCACGGG CCGGGCTGTT TCGCCTGTTC
ACTCGGATCT GGAATTCGGT CGCACTGAAC GACGATACCG AGGTGATGAC GTTGCCGCTG
CCGTCGGAGC GACGGTTGTC GAATATTACT CCGCTGCCCC GGCAGGCCTT CCTGCTGCTC
TCGCTCGAGG GCTTTTCCGA GGAAGAAGTC GCCTTCATTC TGGCGCTCGA CGTCACCGAG
GTCCGCAAGC TGACCGAAGT CGCCGGCCGG GAGATGGCGG CGGAGATCGC CACCGATGTT
TTGATCATCG AGGACGAGAC CTTCATCGCC ATGGACCTCG AGAGCCTGGT GAAGAACCTC
GGCCACAACG TCATCGGCGT CGCCCGGACC CACGCCGACG CCATCGCGCT GGCCAAGACC
AGGAAGCCCG GGTTGATCCT CGCCGACATT CAACTCGCCG ACGGCAGTTC CGGGCTTGAT
GCGGTGAACG AACTGCTGAA GACCTTCGAG GTCCCGGTCG TGTTCATTAC CGCCTATCCG
GAACGGTTCT TGACCGGCGA GCGGCCGGAG CCGGCCTTCC TGATCTCGAA GCCGTTCCAG
CCGGCGATGG TCTCGGCGGT GGCGAGCCAG GCGCTGTTCT TCCAGCGCAA CTCACGCAAT
CGGGCCCCGC GCGCCGCGGC GTCCTGA
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| Protein sequence | MSRSQLVAEH LPLLRRYARA LTGNQASGDA YVGAMLEALL QDQNLLDEQH GARAGLFRLF
TRIWNSVALN DDTEVMTLPL PSERRLSNIT PLPRQAFLLL SLEGFSEEEV AFILALDVTE
VRKLTEVAGR EMAAEIATDV LIIEDETFIA MDLESLVKNL GHNVIGVART HADAIALAKT
RKPGLILADI QLADGSSGLD AVNELLKTFE VPVVFITAYP ERFLTGERPE PAFLISKPFQ
PAMVSAVASQ ALFFQRNSRN RAPRAAAS
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