Gene RPC_4019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4019 
Symbol 
ID3969209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4468442 
End bp4469269 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID637927123 
ProductSulfate ABC transporter, permease protein CysT 
Protein accessionYP_533864 
Protein GI90425494 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.392742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.191669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCACGCA GCGTCATTCC AGGTTTCGGC TTAGCGTTCG GCATCACCGT GCTGTATCTC 
GGCGCGATCG TGCTGCTGCC GTTGTGCGCG CTGATCCTGA AGGCTTCCGA CATCGGTGGC
GCGCAATTGT GGACCATCCT GTCGTCGCCG CGCACGCTGT CGTCGATCCG GGTGACCCTC
ACGATGGCGC TGGCGGCGAC CGCCTTCAAC GCGGTCTATG GGTTGCTGCT GGCCTGGGTG
CTGGCGCGCT ATCAGTTTCC CGGCAAGCGG CTGCTCGACG CGCTGGTCGA TATTCCCTTC
GCGCTGCCGA CCGCGGTGGC CGGCCTCGCT CTCACCGCGC TGTTCTCCAA GAACGGCTGG
TTCGGCGGCC CGCTCGACGC GCTCGGCCTG CAGGTGGTCT ATACCCCGCT CGGCATCGCG
ATCGCGATGG CGTTCGTCAG CGTGCCGTTC GTGGTGCGCA CGCTGCAGCC GGTGATCGAG
GATCTCGGCA GCGACGTCGA GGAGGCCAGC CGCTCGCTCG GTGCCAGCGA TCTGCAGATC
CTCACCAAAA TCATCTTCCC GTCGATCTTT CCGGCGCTGC TCGCCGGCTG TTCGCTGGCG
TTCGCGCGCA GCCTCGGCGA ATTCGGCGCG GTGATCTTCA TCGCCGGCAA TCAGCCGATG
AAGACCGAGA TCGTGGCGCT TTTGACCTTC ATCCGGCTCG AGGAATACGA CTACCAGGCG
GCCGCGGCGA TCGCCACGGT GATGCTGGTG ATGGCCTTTG TGATGCTGAT CGTCACCAAC
GCGGTGCAGG CCTGGAACCT GCGCTATCTC GGCCGCGGAG GGATGTGA
 
Protein sequence
MPRSVIPGFG LAFGITVLYL GAIVLLPLCA LILKASDIGG AQLWTILSSP RTLSSIRVTL 
TMALAATAFN AVYGLLLAWV LARYQFPGKR LLDALVDIPF ALPTAVAGLA LTALFSKNGW
FGGPLDALGL QVVYTPLGIA IAMAFVSVPF VVRTLQPVIE DLGSDVEEAS RSLGASDLQI
LTKIIFPSIF PALLAGCSLA FARSLGEFGA VIFIAGNQPM KTEIVALLTF IRLEEYDYQA
AAAIATVMLV MAFVMLIVTN AVQAWNLRYL GRGGM