| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4003 |
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| Symbol | |
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| ID | 3969193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4451816 |
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| End bp | 4452973 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927107 |
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| Product | patatin |
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| Protein accession | YP_533848 |
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| Protein GI | 90425478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.426633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCCC CGATGGATAC AGCTGCCGCC AAACCGGCTT CGAGTCCCGC CGAAGGTCGC
CGCGTGTTGG TGCTGCAGGG CGGCGGCGCG CTCGGCTCCT ATCAGGCCGG CGCCTATCAG
GCGCTGTGCC ACCACGATTT CGAACCGCAA TGGCTCGCCG GCATCTCGAT CGGCGCCATC
AACGCCGCGA TCATCGCCGG CAATCCGCGC GAGCAGCGGG TGGCGAAGCT GAAGGAATTC
TGGGAGCTGG CGTCGTCGCC GGTGCCGTGG CTGCCCGTGC TGCACGACGA CCGGGTGCAT
TCGCTGTTCA ACGAAACCAG CGCAGCGCTG ACCGCCATGT TCGGCGTGCC CGGCTTCTTC
ACGCCGCGGT TTCCGCCGCC GCTGCTGTTT CCGCCGCAGG ATCTGACCTC GCTGAGCTAT
TACGACACCG CGCCGCTGCG CGCGACGCTG CAGCGGCTGG TGGACTTCGA TCGCATCAAC
GACGAGGCCA AGACCACCCG GCTCAGCCTC GGCGCGGTCA ACATCGCCAC CGGCAATTTC
TGCTACTTCG ACAACACAAG ACAACAGATC GGCCCGGAGC ACGTCATGGC TTCGGCGGCG
CTGCCGCCGG GCTTTCCGGC GGTCGAGATC GACGGCGAAT TCTTCTGGGA CGGCGGCATC
GCCTCCAACA CGCCGCTGGA CTACGTGCTC GGCGAAGAAA CCGTCGACGA TCTGTTGATC
TTCCAGGTCG ATCTGTTCAG CGCCCGCGGC CGGCTGCCGG AGACGCTGCT GGAGGCCGCC
GAGCGCGAAA AGGACATCCG GTTTTCCAGC CGCACCAGGC TCAACACCGA CAAGAACAAG
CAGATCCACA ACACCCGCAA GGCGTTGCGC GATTTGATCG ACAAATTGCC CGACGAACTG
CGCAACGATC CGGCCTACGC CATCCTGCAC GAGGCGGCGG AGGAGAACAC CGTCACCGTG
GTGCATCTGA TCTACCGCAA GCGCAATTAC GAGGCTGCAT CGAAGGACTA TGATTTCTCC
CGCCTCAACA TGCTCGAGCA TTGGAAATCC GGCGAGCAGG ACGTGCATCT GTCGATGCGG
CGTCCGGACT GGCTGCGCCA GCCGCAGGAC GGCGAGACCA TGGTGACCTA CGATCTGACC
AAAGAGGCTT TCCAATAG
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| Protein sequence | MGPPMDTAAA KPASSPAEGR RVLVLQGGGA LGSYQAGAYQ ALCHHDFEPQ WLAGISIGAI
NAAIIAGNPR EQRVAKLKEF WELASSPVPW LPVLHDDRVH SLFNETSAAL TAMFGVPGFF
TPRFPPPLLF PPQDLTSLSY YDTAPLRATL QRLVDFDRIN DEAKTTRLSL GAVNIATGNF
CYFDNTRQQI GPEHVMASAA LPPGFPAVEI DGEFFWDGGI ASNTPLDYVL GEETVDDLLI
FQVDLFSARG RLPETLLEAA EREKDIRFSS RTRLNTDKNK QIHNTRKALR DLIDKLPDEL
RNDPAYAILH EAAEENTVTV VHLIYRKRNY EAASKDYDFS RLNMLEHWKS GEQDVHLSMR
RPDWLRQPQD GETMVTYDLT KEAFQ
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