Gene RPC_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3983 
Symbol 
ID3969406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4437726 
End bp4438163 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID637927087 
Producthypothetical protein 
Protein accessionYP_533828 
Protein GI90425458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.959866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.259222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCT TCGCCTATGC GGCGGAATTT GAGCCGGGCG ATACGCCCGG CGTGATCGTG 
GTGAGCTTTC CGGACGTGCC GGAAGCGATC ACCGAGGGCA ATGGCATGGC GGACGCTCGC
CTGCAGGCGG AAGAGGCGTT GGGGCTTGCG CTGTTGAGCT ACCCGGCGCG CGGTCAGCCG
CTGCCGAAGC CGCGCGCCAA GGGCAAGCGG CTGAGCCTCG TCGCGGTGGC GCCCGACGTC
GCGGCGAAGC TCGCGGTGAT CGAGGCCTTC GTCAGCGCCG GCATCAGCAA GAGCGAATTG
GCGCGCCGGA TGCAGAAGGA CGAGAAGGAA GTTCGCCGCA TTCTCGATCC CAAACATGCC
ACCAAGCTGC CGGCGATGGT CGACGCGCTG CGCGCGCTCG GCAAGCGGCT GGTGATCGGC
GTCGAGGCGG CGGCGTAA
 
Protein sequence
MDSFAYAAEF EPGDTPGVIV VSFPDVPEAI TEGNGMADAR LQAEEALGLA LLSYPARGQP 
LPKPRAKGKR LSLVAVAPDV AAKLAVIEAF VSAGISKSEL ARRMQKDEKE VRRILDPKHA
TKLPAMVDAL RALGKRLVIG VEAAA