Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3968 |
Symbol | |
ID | 3969391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4420356 |
End bp | 4421483 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927072 |
Product | NAD(P)(+) transhydrogenase (AB-specific) |
Protein accession | YP_533813 |
Protein GI | 90425443 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.52416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.395533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG CTGTTGCTAA AGAACTAGAT CCTGCTGAAC CGAGGGTCGC GGCGACGCCC GACACGGTGA AGAAGTTCAA AGCGTTGGGG ATCGATATCG CGATCGAGCC CGGCGCCGGG ATCAAGTCCG GACTGCCGGA TCAGGAATTC ACCGCGGTCG GCGCCACCGT CAGCGCCGAT GCGCTGAAGG ACGCCGATAT CATCATCAAG GTGAAGCGCC CCGAGGCCTC TGAACTTGCG AGCTACAAGC GCGGCGCGCT GGTGATCGCC ATCATGGACC CCTACGGCAA CGAAGCCGCG CTGAAGACCA TCGCCGACGC CGGCGTCTCG GCCTTCGCGA TGGAGCTGAT GCCGCGCATC ACCCGCGCGC AGGTGATGGA CGTGCTGTCG AGCCAGGCCA ATCTGGCCGG CTACCGCGCC GTGATCGAGG CCGCCGAATC GTTCGGCCGC GCCTTTCCGA TGATGATGAC CGCGGCCGGC ACGATTCCCG CCGCCAAGGT GTTCGTGATG GGTGTCGGCG TCGCCGGCCT GCAGGCGATC GCCACCGCGC GCCGGCTCGG CGCCGTGGTC ACCGCCACCG ACGTGCGCCC CGCCACCAAG GAGCAGGTCG AAAGTCTCGG CGCCAAATTC CTCGCCGTCG AAGACGAGGA ATTCAAGAAC GCCCAGACCG CCGGCGGCTA CGCCAAGGAA ATGTCCAAAG AGTATCAGGC CAAGCAGGCC GCGCTCACCG CCGAGCACAT CAAGAAGCAG GACATCATCA TCACCACCGC GTTGATCCCC GGCCGGCCCG CGCCGCGCCT GGTCACCGCC GAGATGGTGG CGTCGATGAA GCCCGGTTCA GTGCTGGTTG ACCTCGCGAT CGAGCGCGGC GGCAACGTCG AAGGCGCGGT GGCCGGTCAG GTCACCGACG TCGGCGGCAT CAAGATCGTC GGCTACACCA ACGTCGCCGG CCGGGTCGCC GCTTCGGCCT CGAGCCTGTA TTCCCGCAAC CTGTTCAACT TCATCGAGAC GCTGTTCGAC AAGGCGTCGA AGTCGCTCGC GGTGAAGTGG GACGACGAGT TGGTGAAGGC CACCGCGCTG ACCAAAGACG GCGCGGTGAT TCACCCGAAC TTCCAGCCGA AAGCTTAA
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Protein sequence | MKIAVAKELD PAEPRVAATP DTVKKFKALG IDIAIEPGAG IKSGLPDQEF TAVGATVSAD ALKDADIIIK VKRPEASELA SYKRGALVIA IMDPYGNEAA LKTIADAGVS AFAMELMPRI TRAQVMDVLS SQANLAGYRA VIEAAESFGR AFPMMMTAAG TIPAAKVFVM GVGVAGLQAI ATARRLGAVV TATDVRPATK EQVESLGAKF LAVEDEEFKN AQTAGGYAKE MSKEYQAKQA ALTAEHIKKQ DIIITTALIP GRPAPRLVTA EMVASMKPGS VLVDLAIERG GNVEGAVAGQ VTDVGGIKIV GYTNVAGRVA ASASSLYSRN LFNFIETLFD KASKSLAVKW DDELVKATAL TKDGAVIHPN FQPKA
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