| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3966 |
|---|
| Symbol | |
|---|
| ID | 3969389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4418613 |
|---|
| End bp | 4420013 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637927070 |
|---|
| Product | NAD(P) transhydrogenase, beta subunit |
|---|
| Protein accession | YP_533811 |
|---|
| Protein GI | 90425441 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.155526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.614792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA ATCTTTCCGC GCTTCTGTAT CTGATCGCTG GCGCGCTGTT CATTCTGTCG
CTGCGCGGGC TGTCGTCGCC CGCCTCCAGC CGCCAGGGCA ACTTCCTCGG CATGACCGGC
ATGGCGATCG CGGTCGCCAC CACGCTGGCC GGCCATCCTC CGGCCGACCT GCTCGGCTGG
GGCCTCGTGA TCCTCGGCAT CGCCATCGGC GGCAGCATCG GCGCGGTGAT CGCCAAGAAG
GTGCCGATGA CCTCGATGCC CGAACTGGTC GCCGCCTTCC ACTCGCTGGT CGGCATGGCC
GCGGTGCTGG TCGCCGCCGG CGCGTTCTAC GCCCCCGAGG CGTTCGACAT CGGCGTCCCC
GGCAACATTC ACGGCGCCAG CCTGATTGAA ATGTCGCTCG GCGTCGCGAT CGGCGCCCTG
ACCTTCACCG GCTCGGTGAT CGCGTTCCTG AAATTGAGCG GCAAGATGAG CGGCGCGCCG
ATCATTCTGC CCGCCCGTCA CGTCGTCAAC ATCGTGCTCG GCGTGGTGAT GCTGGCTGCG
ATCGTCTATC TGGTGATCAC CGGCGACCAG GTCGCGTTCT GGGTCATCAC CGGCATCGCG
CTGTTGCTCG GCGCCTTGCT GATCATCCCG ATCGGCGGCG CCGACATGCC GGTCGTGATC
TCGATGCTCA ACTCCTATTC GGGTTGGGCC GCGGCCGGCA TCGGCTTCAC GCTGGGCAAT
TCGGCGCTGA TCATCACCGG CGCGCTGGTC GGCTCGTCGG GTGCGATCCT GTCCTACATC
ATGTGCCACG CGATGAACCG CTCCTTCATC TCGGTGATCC TCGGCGGCTT CGGCGGCGAG
ACCGCCGCGG CCGGCGGCGG CGCCGGCGGC GAAGTGCGCC CGGTCAAGCT CGGCTCGGCC
GACGACGCGG CCTTCATCAT GAAGAACGCC CAGAAGGTCA TCATCGTGCC GGGCTACGGC
ATGGCGGTGG CGCAGGCCCA GCACGCGCTG CGCGAAATGG CCGACACGCT GAAGAAGGAA
GGCGTCGAGG TGAAGTACGC GATTCATCCG GTCGCCGGCC GTATGCCGGG CCACATGAAC
GTGCTGCTCG CCGAAGCCAA CGTGCCCTAC GACGAGGTGT TCGAACTCGA GGACATCAAC
TCGGAATTCG CGCAGGCCGA CGTGGCCTTC GTGATCGGCG CCAACGACGT CACCAACCCG
GCGGCCGAGG ACGACAAGAC CTCGCCGATC TACGGCATGC CGGTGTTGCA GGTCTGGAAG
GCCGGCACCG TGATGTTCAT CAAGCGGTCG TTGGCGTCGG GTTATGCCGG CATCGACAAC
CCGCTGTTCT ATCGCGACAA CACGATGATG CTGCTCGGCG ACGCCAAGAA GATGACCGAG
AACATCGTCA AGGGCATGTA A
|
|---|
| Protein sequence | MNANLSALLY LIAGALFILS LRGLSSPASS RQGNFLGMTG MAIAVATTLA GHPPADLLGW
GLVILGIAIG GSIGAVIAKK VPMTSMPELV AAFHSLVGMA AVLVAAGAFY APEAFDIGVP
GNIHGASLIE MSLGVAIGAL TFTGSVIAFL KLSGKMSGAP IILPARHVVN IVLGVVMLAA
IVYLVITGDQ VAFWVITGIA LLLGALLIIP IGGADMPVVI SMLNSYSGWA AAGIGFTLGN
SALIITGALV GSSGAILSYI MCHAMNRSFI SVILGGFGGE TAAAGGGAGG EVRPVKLGSA
DDAAFIMKNA QKVIIVPGYG MAVAQAQHAL REMADTLKKE GVEVKYAIHP VAGRMPGHMN
VLLAEANVPY DEVFELEDIN SEFAQADVAF VIGANDVTNP AAEDDKTSPI YGMPVLQVWK
AGTVMFIKRS LASGYAGIDN PLFYRDNTMM LLGDAKKMTE NIVKGM
|
|---|
| |