| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3962 |
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| Symbol | rpsU |
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| ID | 3969249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4415163 |
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| End bp | 4415465 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927066 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_533807 |
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| Protein GI | 162136025 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00936772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.750031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAGGTTC TCGTTCGCGA TAATAATGTC GATCAAGCCC TCAAGGCGCT GAAGAAGAAG
ATGCAGCGCG AGGGTATCTT CCGCGAGATG AAGCTCCGCG GTCATTACGA GAAGCCCTCT
GAGAAGAAGG CCCGCGAAAA GGCGGAAGCC GTGCGCCGTG CGCGCAAGCT CGCGCGCAAG
AAGCTGCAGC GCGAAGGTCT GTTGCCGATG AAGCCGAAGC CGGTGTTCGG CGCTGGTCCC
GGCGGCGATC GTGGCCGTGG TCCGGCCGCT GGTGCTGGCG CCGGCCCGCG TGGCCCGCGC
TAA
|
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| Protein sequence | MQVLVRDNNV DQALKALKKK MQREGIFREM KLRGHYEKPS EKKAREKAEA VRRARKLARK
KLQREGLLPM KPKPVFGAGP GGDRGRGPAA GAGAGPRGPR
|
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