| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3892 |
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| Symbol | |
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| ID | 3969255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4322733 |
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| End bp | 4323935 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926995 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_533737 |
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| Protein GI | 90425367 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.562266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAG GAGCCGACGA CGCTCGCGTT GAACCCGAAC CGGTCGCATC GATGCGATTG
CGGGCAGAGC GCCCACGTGT GACGCGATTG TCACGCAAGG TGCTGGCAGG AGGTGCGGCC
GTTGGGACAT TTGCGATCTT CGGTGCGGTG CTATGGGCGC TGCAGAACAA TCGGTCGCGC
ACCACACAAT CAAGCGAACT CTACACAACC GAGCATCGCC AGGTCGCCGA TGGTCTGACG
GGATTGCCGC GCGACTATGC CGGGGTGCCG CGGCAGGCGC CTCCACTTGG ACCGGCGTTA
CCGGGCGATC TCGGCCGGCC GATCCTGCGC GCGCAAAATG CGCCGTCGAC ACTCATACCC
GGCGCCGATC AAGAGCAGCA GCGCGAGAGC CAGGAGATCG AAGCAGCGCG GCTCAGCCGG
CTGTTTGCTT CGACCAATAT TCGGGACTTG CCGATGCCGG CGCTGCAAAC AGTTGCGACT
GATTCATCAG CGACAACCAC GAGCCAGTCT GCTCACCCCG CGGCCGACGA CGCCTTTGCT
CAGAATGGCC AGGACCGCAA GCTCGCCTTC GTCAATGGCC CGATCGATCG CCGAACCACA
AGCCCCGACC GGGTCGCGGC GCCTGCGTCA ACCTATGTGG TGCAGGCTGG CAACGTCATC
CCGGCGTCGC TCATCACTGG GATCCGCTCG GATCTTCCTG GGCAAATCAC CGCTCAGGTT
ACCGAGAACA TTTTTGACAG TCCAACCGGG CGTTGGCTGC TCGTTCCGCA GGGAGCCCGG
CTAATAGGGA TTTATGACAG CCAAATTGCG TTCGGTCAGT CCCGGGTGCT GTTGGTCTGG
ACCCGCCTGA TCATGCCGAA TGGTCGATCA ATTGTATTGG AACGACAGCC TGGCGCCGAC
ACTGCCGGTT ATGCAGGGCT TGAGGATGGG GTCGATCAAC ATTGGGGTGC ATTGTTCAAG
GCGGCGCTGC TTTCGACCTT GCTCGGCGTC GGAACGGAAC TCGGATCAAG CACGGCCACG
AGCGGCAACA ACGCAGACAT CATCCAGGCC CTTCGACGCG GGTCGAGCGA CAGTCTGAAT
CAGACCGGTC AGCAAGTGGT TCGACGCAAT CTCAATATTC AGCCGACATT GACAATCCGA
CCGGGATTTC CGGTGCGCGT GATCGTCAAT CGGGACCTCG TGCTCGAACC CTACAAAGGT
TAG
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| Protein sequence | MSGGADDARV EPEPVASMRL RAERPRVTRL SRKVLAGGAA VGTFAIFGAV LWALQNNRSR
TTQSSELYTT EHRQVADGLT GLPRDYAGVP RQAPPLGPAL PGDLGRPILR AQNAPSTLIP
GADQEQQRES QEIEAARLSR LFASTNIRDL PMPALQTVAT DSSATTTSQS AHPAADDAFA
QNGQDRKLAF VNGPIDRRTT SPDRVAAPAS TYVVQAGNVI PASLITGIRS DLPGQITAQV
TENIFDSPTG RWLLVPQGAR LIGIYDSQIA FGQSRVLLVW TRLIMPNGRS IVLERQPGAD
TAGYAGLEDG VDQHWGALFK AALLSTLLGV GTELGSSTAT SGNNADIIQA LRRGSSDSLN
QTGQQVVRRN LNIQPTLTIR PGFPVRVIVN RDLVLEPYKG
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