| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3859 |
|---|
| Symbol | |
|---|
| ID | 3969126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4287902 |
|---|
| End bp | 4290610 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637926969 |
|---|
| Product | ATPase, E1-E2 type |
|---|
| Protein accession | YP_533711 |
|---|
| Protein GI | 90425341 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGG ACACTACCTC AGTCTATCAC GCCCTCCAGA TCACAGACGT TCTGAAAGCA
CTGAACGCCA GAACTGAGGG CCTGACCTCC AACGAGGCAG CGCGCAGACT TGCTGCCCAT
GGTCCCAATC GGTTGCCGGA GGCGCCGCAG CGCAGCGCAT TTGTTCGCTT CCTGCTGCAT
TTTCACAACA TCCTCATCTA CGTGCTGCTG GCATCCGCGA TCATCACCGC AGCCCTCGGC
CACCTCGTCG ACACCGGCGT CATCCTCGCT GTTGTGCTGG CCAATGCGAT CATCGGGTTC
ATCCAAGAAG GACGAGCCGA AGACGCGATG GCCGCGATTA GAGGGATGCT GGCGCCGCAC
ACCGCGGTGC TGCGCGATGG CGCGCGCCGT AGCATCGACG CGGTCGATCT GGTTCCTGGC
GATGTCGTGC TGCTCGAAGC CGGCGATCGC GTGCCGGCGG ATCTGCGCCT GATCGAAGCG
CGCGGCCTCA AGGTCGAGGA GGCGATCCTC ACCGGCGAAT CTGTCCCCGT CGACAAGGAC
GTCTCGGCTG TGGCGGAAGA TGCTGTGCTC GGCGACCGCA CCTCGATGCT GTTCAGTGGA
ACGCTGCTGG TCGCTGGTAC CGTTCGTGGT GTGGTGGCGG CGACGGGTGC GGATACGCAG
ATCGGTCAGA TCAGCGGCAT GCTGGCGACC GTGGAGATGC TGACGACGCC TCTGGTCCGG
CAGATCGACA TCTTCGCGCG GTGGCTCACC GTCTTCATCC TGCTGGTCAG TGCCGGGCTG
CTGGCATACG GCATCTTCGT TCGGCATCTG CCATTCGAAG AGATGTTCAT GATCGTGGTC
GGGCTTTCCG TCGCGGCGAT ACCGGAGGGC CTGCCTGCGG TGCTCACCAT CACGCTTGCG
GTGGGGGTGC AAGCGATGGC GCGGCGCAAT GCGATTGTTC GGCGCTTGCC CGCCATCGAG
ACGCTGGGCT CGGTCTCGGT GATCTGTACC GACAAGACCG GCACGCTCAC GCGCAATGAG
ATGATGGTGA TGGCACTGGC GTCGGCCGAT CGCCGGTTCG CGGTCGAGGG CAACGGCTAT
GCGCCGCAGG GTGTTATTCG AACGGGCGAT GCGGTGGCCG ACCCAGCCGA TCATGCCGTC
CTGATCGAAT TCGCCCGCGG CGCTGCGCTT TGCAACGACG CGGCGCTGGT CCGGTCCGGC
GAGGACTGGC GGGTCGAAGG CGATCCGATG GAGGGCGCGC TACTGGCGCT GGCGGGCAAA
ATCACCGACG CGGTCGCCTT CCACGGCCTC AGCCGCACCG ATGCCATCCC GTTCGATGCG
ATCTATCGCT ACATGGCGGT GCTCCACCAT GATCACGTGG GGCACGGCTT CGTTCACGTC
AAAGGCGCGC CGGAAGCGAT TCTGCCGATG TGTGCCGGTC AGCGCAGCGC CGACGGCGGC
GTTGCGCCGC TCGATCCGGA ATATTGGCAT GCCAGAGTGG AGGAGCTTGC GAGCGACGGA
CTGCGGGTGA TCGCGATGGC GTCACGCATG ATGCGGCAGC AAGACACCAT CCTGAACACC
GATGATCTGC AGGGCCAGCT GGTTCTGATC GGGCTCGTCG GCTTGATCGA CCCGCCGCGT
CCGGAAGCCA TCGACGCCGT CGCCGACTGC CACGGCGCCG GGATCAGAGT GAAGATGATC
ACCGGCGATC ACGGCGCGAC GGCACGAGCG ATCGCCGCGA AGATCGGTCT GCGCAATTCC
CGATCGATCC TCACAGGCGC CGCTATCGAC CGGATGTCGG ACGCCGAATT GGCGGTCGCG
GTGATTGAGA CCGACGTCTT TGCCCGGACC TCGCCGGCCC ACAAGCTTCG GCTGGTCACG
GCCTTGCAGT CGCACGGTCT CACCGTTGCG ATGACCGGCG ACGGCGTCAA CGACGCTCCC
GCGCTCAAGC GGGCGGACGC CGGCACCGCC ATGGGGCAGA AGGGCAGCGA GGCGGCCAAG
GAAGCCTCGG AACTCGTGCT TGCCGATGAC AATTTCGCCT CGATCGCCGC TGCGGTGCGC
GAGGGACGCA CGGTCTACGA CAACATCAAG AAGGTCATCA GTTGGACGTT GCCGACCAAC
GCCGGCGAGG CGATGACCAT CATGGTCGCG CTGCTCGCCG GCATGACATT GCCGGTGACG
GCGGTGCAAA TCCTCTGGAT CAACCTCATC ACGGCGACCA CGCTGGGTAT TGCGCTGGCG
TTCGAGCCGA GCGAGCCGGG CACGATGCAG CGCCCACCAC GTCCCCGTGA CGCCCCGATT
CTGACCGGCG AACTGATCTG GCACATCCTG CTGGTCTCGG CCTTGTTCGT GGTCGCCGTG
TTCGGGGTGT TTTCCTATGC GTTGGACAAA GGTTATCCGC TCGAGTTGGC GCAGACCATG
TCGGTCAACA CTTTGGTGGT TCTCGAGATA TTCCACCTGT TCTTCATTCG GAACATTCAC
GGTACCTCAT TGACCCTGGC CGCGGTGCGA GGGACACCGA TCGTCTGGCT CTCGGTGGTC
ACCGTCACAG CCGCGCAATT CGCGATCACC TATCTGCCGC CCTTGCAGAA GCTGTTCGGG
ACCCGGGCCG TTCCGATTCT CGACGGCGTG CTCATTGTTG CCGTCGGGAT GGCGTTCTTT
GCCCTGATCG AGACCGAAAA GCAGATGCGC CTCGCATTCC GTCGTCCGGC GACAACGCCT
GGTCACTGA
|
|---|
| Protein sequence | MTKDTTSVYH ALQITDVLKA LNARTEGLTS NEAARRLAAH GPNRLPEAPQ RSAFVRFLLH
FHNILIYVLL ASAIITAALG HLVDTGVILA VVLANAIIGF IQEGRAEDAM AAIRGMLAPH
TAVLRDGARR SIDAVDLVPG DVVLLEAGDR VPADLRLIEA RGLKVEEAIL TGESVPVDKD
VSAVAEDAVL GDRTSMLFSG TLLVAGTVRG VVAATGADTQ IGQISGMLAT VEMLTTPLVR
QIDIFARWLT VFILLVSAGL LAYGIFVRHL PFEEMFMIVV GLSVAAIPEG LPAVLTITLA
VGVQAMARRN AIVRRLPAIE TLGSVSVICT DKTGTLTRNE MMVMALASAD RRFAVEGNGY
APQGVIRTGD AVADPADHAV LIEFARGAAL CNDAALVRSG EDWRVEGDPM EGALLALAGK
ITDAVAFHGL SRTDAIPFDA IYRYMAVLHH DHVGHGFVHV KGAPEAILPM CAGQRSADGG
VAPLDPEYWH ARVEELASDG LRVIAMASRM MRQQDTILNT DDLQGQLVLI GLVGLIDPPR
PEAIDAVADC HGAGIRVKMI TGDHGATARA IAAKIGLRNS RSILTGAAID RMSDAELAVA
VIETDVFART SPAHKLRLVT ALQSHGLTVA MTGDGVNDAP ALKRADAGTA MGQKGSEAAK
EASELVLADD NFASIAAAVR EGRTVYDNIK KVISWTLPTN AGEAMTIMVA LLAGMTLPVT
AVQILWINLI TATTLGIALA FEPSEPGTMQ RPPRPRDAPI LTGELIWHIL LVSALFVVAV
FGVFSYALDK GYPLELAQTM SVNTLVVLEI FHLFFIRNIH GTSLTLAAVR GTPIVWLSVV
TVTAAQFAIT YLPPLQKLFG TRAVPILDGV LIVAVGMAFF ALIETEKQMR LAFRRPATTP
GH
|
|---|
| |