Gene RPC_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3852 
Symbol 
ID3969119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4280321 
End bp4280713 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID637926962 
Productputative monovalent cation/H+ antiporter subunit G 
Protein accessionYP_533704 
Protein GI90425334 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1320] Multisubunit Na+/H+ antiporter, MnhG subunit 
TIGRFAM ID[TIGR01300] monovalent cation/proton antiporter, MnhG/PhaG subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.922249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGA TAGGTGAAGT TCTGGTCTCG GCGCTGATCC TGGTCGGCGC ATTCTTTCTG 
TTCGTTGGAT CGTTCGGACT GGTGAAGCTG CCGGACATCA TGCGCCGGCT GCACGCGCCC
ACCAAGGCGA CGACGCTCGG CATCGGGTCG CTGCTGATCG CTTCGATGCT CTACTTCGCT
CTGGTGCAGG GTGCGCCCTC CGTGCACGAG TTGATGATCG CAGTGTTCCT GTTTCTGACC
GCGCCGATCA CCGCGCATAT GATCGCCAAA GCCCATCTGC TGCGCAATCG CGCGCTGCAA
AGGCGTGTGC CGCAGCCCCC TGGTGGGCAG AGTTGGGCAA CATTGGCGCC GCGGAACGAA
AACCCTCAAG CACCCCCGGC GCGGCGACCT TGA
 
Protein sequence
MAGIGEVLVS ALILVGAFFL FVGSFGLVKL PDIMRRLHAP TKATTLGIGS LLIASMLYFA 
LVQGAPSVHE LMIAVFLFLT APITAHMIAK AHLLRNRALQ RRVPQPPGGQ SWATLAPRNE
NPQAPPARRP