| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3829 |
|---|
| Symbol | |
|---|
| ID | 3969288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4259699 |
|---|
| End bp | 4260694 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637926939 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_533682 |
|---|
| Protein GI | 90425312 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCGG TGATTGTCGC CGTCGTCGCG TTGGTCGCGC TGGGCGCAGC CGCCGCGCTC
GCGCTCTCCT GGGGCCTGAC CCGCATCATC GAAGCGCGCA ACCCGCCGCG CGGCCGCTTC
GTCAACGTCG ACGGGGCGCG GCTGCACGTC GTCGATCTGC CGTCGCAAGA CGGTGACAGC
GCCGCCCCGA CGGCGCTGCT GCTGCACGGC GCCAATCTCT GCCTCGACGA CATGCGGATG
GCGCTCGCCG GCGTGTTGTC GAAGCGGATG CGGGTGATCA TTCCGGATCG ACCGGGTCAA
GGCTACAGCG AGCCCGGCCC CGGCCCGGTC TCTTCGGCGG GCTATCAAGT CAAACTGCTG
CGCGGGCTGG TGCAACAGCT CGGTGCCGGA CCGCTGATCG TGGTCGGGCA TTCGTTCGGC
GGGCTGATCG CGCTACGCTA CGCGCTGGAC GATCCCGACG CCGTCGCCGG CCTGGTGCTG
ATCAATCCGA CCACGCATCC GCGCCCCGAA GGGCTGCCGT GGTTTCAACG CCTCGCCGGC
GTCCTGATCG GCCCGCTCGC CACCTATACG CTGCTGCTGC CGCTGTCCTT GGCGATGCTC
GGGCGCCTGA CCGAGCGAAT GTTTCGGCCG GAACCGGCGC CGCCGGACTA TGCGCAACGC
AGCCGCCTGA CGCTCGGACT GACGCCGCGG CGGTTCTCCG CCAGCCTGCG GGAATATTCC
GACCTGCGCG ACCAATTGAT CGGTTTCGTG CCGCGCTATG GCACGATCGC CACGCCCACC
GTGATCGTCG CCGGCGATGC CGACCCGGTG GTGCCGCCCA AGGTGCATGC CGAAGCACTC
GCGGCGGCGA TGCCCGACGC CAAGCTGGTT GATCTCGCCG GCGCCGGACA TATGGCGCAC
CACGCCCATG CCACCGCGAT CGGCTACGAG ATCCTGCGGC TCGCCCTCGC GCGCTCAGAG
CCGGTCGACT CTGAGGAACA AGGCCCAGAT CAGTGA
|
|---|
| Protein sequence | MISVIVAVVA LVALGAAAAL ALSWGLTRII EARNPPRGRF VNVDGARLHV VDLPSQDGDS
AAPTALLLHG ANLCLDDMRM ALAGVLSKRM RVIIPDRPGQ GYSEPGPGPV SSAGYQVKLL
RGLVQQLGAG PLIVVGHSFG GLIALRYALD DPDAVAGLVL INPTTHPRPE GLPWFQRLAG
VLIGPLATYT LLLPLSLAML GRLTERMFRP EPAPPDYAQR SRLTLGLTPR RFSASLREYS
DLRDQLIGFV PRYGTIATPT VIVAGDADPV VPPKVHAEAL AAAMPDAKLV DLAGAGHMAH
HAHATAIGYE ILRLALARSE PVDSEEQGPD Q
|
|---|
| |