| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3793 |
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| Symbol | |
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| ID | 3969213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4218369 |
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| End bp | 4219130 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926903 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_533646 |
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| Protein GI | 90425276 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCC TATTCGACGT CAGTAAAGAA ACCATCCTCA TCACCGGCGC CTCGCAGGGG
CTCGGCCGGC AATTCGCCCG GGTGCTCGCG GCGCGCGGCG CCGCCGTGGT GCTGGCGGCG
CGGCAGCTCG ACAAGCTGCA CAGCCTGCAG GCCGAAATCC TCGCCGCCGG CGGCCGCGCC
GCTGCGGTGA AGCTGGACGT CACCGACACC GGCGCGATCG GCGGCGCGAT CGACGCGGCG
GAAGCGCAGC TCGGTCCGCT CAGCGTGCTG ATCAACAATG CCGGCATCGC GGTGGAGAAG
CCGGCGCTCG AACAGAGCGA GGCGGATTGG GACGCTGTGA TCAACGCCAA TCTCAAGGGC
GCGTACTTCA CCGCCACCGA AGTGGCGCGG CGGATGACGG CGCGCGGGCA GGGCGGCAAT
ATCGTCAACG TCGCCTCGGT GCTCGGCTTG GGGGTGATGA AGTATCTGGC GCCTTACACC
ATCTCCAAGG CCGGTCTGGT GCAGGCCACC AAGGCGCTGG CGCTGGAATG GGCCGGCAGC
GGCATCCGCG TCAACGCGCT GGCGCCGGGC TACATCGACA CCGATATCAA CCATGACTTC
TGGGCCACGC CGGGCGGCGA GAAGCTGGCG AAGCGCATCC CGCAGCGCCG CGTCGGCCAC
GAATCCGACC TCGACGGCGC GCTGCTGTTG TTGGCGTCGG GCGCCTCGCG CTACATGACG
GGGAGCGTCA TCACCGTTGA TGGCGGGTTT TTGCTGACGT AG
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| Protein sequence | MSVLFDVSKE TILITGASQG LGRQFARVLA ARGAAVVLAA RQLDKLHSLQ AEILAAGGRA
AAVKLDVTDT GAIGGAIDAA EAQLGPLSVL INNAGIAVEK PALEQSEADW DAVINANLKG
AYFTATEVAR RMTARGQGGN IVNVASVLGL GVMKYLAPYT ISKAGLVQAT KALALEWAGS
GIRVNALAPG YIDTDINHDF WATPGGEKLA KRIPQRRVGH ESDLDGALLL LASGASRYMT
GSVITVDGGF LLT
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