| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3729 |
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| Symbol | |
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| ID | 3971474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4149958 |
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| End bp | 4151775 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926839 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_533583 |
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| Protein GI | 90425213 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCGCGA TCGGCGTTAC GTCGACGCAG GCGGCGCCGG CCGAACCGGT CTGGCGTCAC
GGCCTGTCGC TGTTCGGCGA CGTCAAATAT CCCGCCGACT TCAAGCGATT CGACTACGTC
GATGCCAACG CCCCGAAAGG CGGCGCGGCG CGGCAGATTT CGATCGGCAC CTTCGATAAT
TTCAATCTGG CGGTGGCCGG CGTGAAGGGC TCGATCGCGC CCGCGGTCGG GCTGATCTAC
GAAACCCTGA TGACGCAATC GCAGGACGAG GTCGGCGCCG AATACGGGCT GCTCGCGGAA
GCGGCGGCGC ATCCCGACGA TCACTCCTCG GTGACCTATC GGCTGCGCGC CAATGCGCGC
TGGCACGACG GCAAACCGGT GACCCCGGAG GATGTGATCT TCTCGCTGGA GGCGCTGAAG
AAATACAGCC CGCGTTATGC CTCGTATTAT CGCCACGTCG TGAAGGCCGA GAAGACCGGC
GACCGCGAGA TCAAATTCAG CTTCGACATG CCGGGCAACC GCGAATTGCC GACCATCGTC
GGCGAACTCG TCGTGTTGCC GAAGCATTGG TGGGAGGGCA GCGACGAGCA GGGCCGGCCG
CGCGACATTT CCGCGACCAC GCTGGAAAAG CCGCTCGGGT CGGGTCCGTA TCGCATCAAG
GATTTCGTCG CCGGCCGTTC GGTGACGCTG GAACGGGTCA AGGACTATTG GGGCGCCGCG
GTGCCGGCGC GGGTCGGCCA GAACAATCTC GACGAACTGC GCTACGAATT CTTCCGCGAC
AATCTGGTGG CGCTGGAAGC CTTCAAGGCC GACCAGGCCG ACTGGATCTT CGAGAATTCC
GCCAAGCAAT GGGCCACCGC CTATGACTTC CCGGCGGTGA CCGAGAAGCG CGTCGTCAAG
GAAGAATTCC CGATCAACGA TTCCGGGCGG ATGCAGGCCT TCATCTTCAA TCTGCGCCGC
GAGATGTTCC AGGATGCGAG GCTGCGCCGC GCCTTCAACT ACGCGTTCGA TTTCGAGGAG
ATGAACAAGC AACTGTTCTA CGGACAATAC AACCGGATCA ACAGCTACTT CGAAGGTACC
GAACTGGCCT CCAGCGGGCT GCCGCAGGGT GCCGAACTGG CGCTGCTGGA GCCGTTGCGC
GACAAGTTGC CCGCCGAGCT GTTCACCACG CCCTACGCCA ACCCGGTCGG CGGCAATTCG
GACGCGGTGC GCGGCAATCT GCGCGAGGCG ATGCGGCTGT TGAAGGAGGC GGGATTCGAA
GTGCGCGACC GCCGGCTGGT CGATGCCGCC GGCAAGCCGG TGCTGGTGGA GATCCTGGTG
CGGGATCCCT CCTCGGAGCG GATCGCGCTG TTCTACAAGC CGTCGCTGGA ACGGATCGGC
GTCACGGTGT CGATCCGCAC CGTCGACGAC GCGCAGTACG AGAACCGGGT TCGCGCGTAC
GATTTCGACA TGATCACCGA TCTGTGGGGC CAGTCGCTGT CGCCCGGCAA CGAGCAGCGC
GACTATTGGG GCTCGCAGGC CGCCGATCAG CCGGGCTCGC GCAACACCAT CGGCATCAAG
AATCCCGCGG TCGATGCGCT GATCGAGAAA GTGATCTTCG CCAAGGACCG CGCCTCGCTG
GTCGCCGCCA CCCGCGCGCT CGATCGCGTG TTGCTATGGA ATTTCTATCT GGTGCCGCAG
TTCACCTACG GCTATGCGCG CTACGCGCGC TGGGATCGCT TCAGCCACGC CGAGCTGCCG
AAATACGCCC GCGCCGGGTT GCCGTCGCTG TGGTGGTACG ACGCCGACAA GGCCGCCCGG
ATCGGCAAAC GCTCTTGA
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| Protein sequence | MSAIGVTSTQ AAPAEPVWRH GLSLFGDVKY PADFKRFDYV DANAPKGGAA RQISIGTFDN
FNLAVAGVKG SIAPAVGLIY ETLMTQSQDE VGAEYGLLAE AAAHPDDHSS VTYRLRANAR
WHDGKPVTPE DVIFSLEALK KYSPRYASYY RHVVKAEKTG DREIKFSFDM PGNRELPTIV
GELVVLPKHW WEGSDEQGRP RDISATTLEK PLGSGPYRIK DFVAGRSVTL ERVKDYWGAA
VPARVGQNNL DELRYEFFRD NLVALEAFKA DQADWIFENS AKQWATAYDF PAVTEKRVVK
EEFPINDSGR MQAFIFNLRR EMFQDARLRR AFNYAFDFEE MNKQLFYGQY NRINSYFEGT
ELASSGLPQG AELALLEPLR DKLPAELFTT PYANPVGGNS DAVRGNLREA MRLLKEAGFE
VRDRRLVDAA GKPVLVEILV RDPSSERIAL FYKPSLERIG VTVSIRTVDD AQYENRVRAY
DFDMITDLWG QSLSPGNEQR DYWGSQAADQ PGSRNTIGIK NPAVDALIEK VIFAKDRASL
VAATRALDRV LLWNFYLVPQ FTYGYARYAR WDRFSHAELP KYARAGLPSL WWYDADKAAR
IGKRS
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