| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3712 |
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| Symbol | |
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| ID | 3972335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4131665 |
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| End bp | 4132462 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926822 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_533566 |
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| Protein GI | 90425196 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.241083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG CACGCATTGT CGTCCTGACC ATCGCTGTCG GTGCCGGCGG CGTTGCCGCC
TATCTCGCCA GCGGCGCCGA CCAGCAGCCG CCGCCGGCAG CGCCGGTGGC CCAGCTGCCG
ACGGTGGACG TGCTGGTCGC GAAATCGGAC ATCCCGCTGG GACAGGCGCT CACCCCGGGC
GACGTGCAGT GGCAGGTCTG GCCGGCGGCC ACCGCCAGCG AAATGTTCAT CCGTCGCAAT
GTGCGCCCGG ACGCCACCAC CCAGATCGTC GGATCGATCG CGCGCTCGGC CTTCATCGCC
GGCGAGCCGA TCCGGGATCT GAAACTGGTC AAGGCCAACG GCTCCGGCTT CATGGCGGCG
ATTCTGCCGT CCGGGATGCG CGCGGTCTCG ACCGAAATCT CACCGGAAAC CGGCGCCGGC
GGCTTCATCC TGCCGAACGA CCGGGTCGAC GTCATTCTGT CCAAGCGCGA GAAGAATCCC
GACGCGCGCG CCTCCGGCGA CGGCGTCAAT TCCGAGATCA TCCTCAGCAA CATCCGGGTG
CTGGCGATCG ACCAGACCAT CGAGGAGAAG AACGGGCAGA AGGTCGTGGT CGGCAAGACC
GCGACGCTCG AACTGAAGCC CGAGCAATCC GAGGGGCTGG CCCGCGCCCG CCAGAGCGGC
ACGCTGTCGC TGGCGCTGCG CAGCCTGGCC GACGCCAATT CGGCGGTCGC CGATACTCCC
GACGATCGCA GCGCCAAGCG CGACAGCATC AATGTGGTGC GATTCGGTGT TTCGACCCCG
ACCACGACCC AGAAGTGA
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| Protein sequence | MNTARIVVLT IAVGAGGVAA YLASGADQQP PPAAPVAQLP TVDVLVAKSD IPLGQALTPG
DVQWQVWPAA TASEMFIRRN VRPDATTQIV GSIARSAFIA GEPIRDLKLV KANGSGFMAA
ILPSGMRAVS TEISPETGAG GFILPNDRVD VILSKREKNP DARASGDGVN SEIILSNIRV
LAIDQTIEEK NGQKVVVGKT ATLELKPEQS EGLARARQSG TLSLALRSLA DANSAVADTP
DDRSAKRDSI NVVRFGVSTP TTTQK
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