| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3682 |
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| Symbol | |
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| ID | 3971655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4104270 |
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| End bp | 4107050 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926792 |
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| Product | malto-oligosyltrehalose synthase |
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| Protein accession | YP_533536 |
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| Protein GI | 90425166 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTG CCATTCCGAC CGCGACCTAT CGCGTGCAAT TGACCGCCGA TTTCGGCTTC
GACGATGCCG CCGCCATCGT CCCCTATCTG AAGTCGCTGG GCATCACCCA CCTGTATGCG
TCGCCGTTCC TGAAAGCCCG CAAGGGCTCT AGCCACGGCT ACGACATCGT CGACCACACC
AAGATCAATC CTGAACTCGG CGGCGAGGAC GGCTTCGAGC GGCTGTCCGC AACGCTGAAA
CAACATGATC TCGGCCTGAT CCTGGACTTC GTGCCCAACC ATGTCGGGGT GCATTTCGCC
GACAACCCGT GGTGGCTCGA CGTGTTGGAA TGGGGACCGG CGTCGCCGCA CGCCGCTTCG
TTCGACATCG ATTGGGATAT CCTGCCGCAT CGGCCGCGCG GCGGCGTGCT GTTGCCGATC
ATCGGCTCGT CCTACGGCGA GGCGCTGGAG CGCGGCGAGA TCGAGCTGCG CTACGACGCC
GAGAGCGGCA GTCTGTCGGC CTGGTACTTC GAGCATCGGC TGCCGATCGC ACCGCAGCGC
TATGGCGAAG TGCTGCGCAA CGTGGTGAAG GCGGCCGAGG CCGAGCAGCA ACCGGGCGGC
CGCGCCATCC TCGAACTCGT GCAACGCTCC CCGGTGCCGC GCCAGCCGGA CCGCGCCGCG
GCGCCGGCGT TCAAGGACGC GTTGAAACGC ATTCCCGGCA GCGCCGCGAT CATCGCGCGC
GGCTTAGAGG CCTATCGCGC TGGCCAGGAT CGCCCGGCGC AGACCCAGAT GCTGCACCTG
TTGCTGGAAC GCCAGCACTA CAAGCTCGGG CATTGGCGAC TGGCGTCCAG CGAAATCAAC
TACCGGCGGT TCTTCGACGT CAACAGCCTG GCCGGGCTGC GGGTCGAGGA CGCCGGCACC
TTCGAGGCGA TCCACCAGCT AGTGCGGCGG CTGATCGCCG AAGACAAGCT GCAGGGCCTG
CGGCTCGACC ATATCGACGG GCTGCGCGAC CCCGCGCAAT ATTTCCAGCG GCTGCGCCGG
CTGCTGCGCG AGGCGCGGGG TGACACCGCA CAGCCGTTCT ACATGCTGAT CGAAAAGATC
CTCGGCGAGG ACGAGAGCCT GCGCCGCTTC ACCGGGGTGC ACGGCACCAC CGGCTACGAG
TGGATGAACG TGATCACGCA GGTGCTGGTC GACGGCGCCG GGCTTGCCGC ATTGGACGAG
GTGTGGCGCC AGGTCAGCAA CACGCCGCCG AAATTCGCCC CGGTGTTGAA AGAGGCCAAG
CGGCGGGTGC TGGAAACCCT GCTGCTCAGC GAATTCACCG TGTTGTCGCG GTTGTTGGCG
CGGATCGCCG CCGGGCATTA CTCGACGCGG GATTTTTCCG CCGACAATCT GCGGCAGATC
CTGGAACTCT ATGTGCTGCA CTTCCCGGTC TATCGCACTT ATCTGACCGC CGCGGGGCCG
ACCGCGCTCG ACCGCGAACT GATCGCGCAG ACCATCGAAA AGGCCCGCGC CGAATGGTTC
AACGCCGACG AGGGGATTTT CGATTTTCTG CGCGACGTGC TGACGCTGGA TCTGATCAAG
CCCGGCCGCG CCGCGCATTC CAAGCCGCGG GTGCGCCGCT TCGCGCTGAA GCTGCAGCAA
TTCACCGGCC CGACCATGGC GAAGTCGCTG GAGGATACCG CGTTCTATCG CTATCACCGG
CTGCTGGCGC TGAACGAGGT CGGCGGCGAT CCGTCCGCTG ACGCGATGTC GATCGACAGC
TTCCACGAAA CCATGCGCAA GCGCGCGATC GACTGGCCGC ACGGCATGAC GGCGACCGCC
ACCCACGACA CCAAACGCGG CGAGGACGCC CGCGCGCGGC TGTTGGCGCT GGCGGAAATC
CCCGGCGAAT GGTCGGCCTT GGTGGCGAAA TGGAAGATGC TGAACGCGCC GCATCTCGTC
ATCAAGGGCG ACGCCCGAAC CCCGTCGGCG CCGTTCGAAT ACATGCTGTA TCAGGCGCTG
GTCGGCGCCT GGCCGCTCGA CGGCGATCCG GCCTTTCTCG ACCGCATGCA GGCCTATGCG
CTGAAGGCGG CGCGCGAGGG CAAGCAGGAA ACCAGCTGGC TCAATCCCAA CCTGGATTAC
GAGGAAGGCG TCAACGGATT CCTGGCGCGG ATCCTCGATC CCGCCGTCGC CGGCGACTTC
ATCGCCCAGA TGCAGACGCT GGTGCAACGC GTGGCGTTGC TCGGCGCGCT GAACTCGCTG
AGCCAGGTGA CGCTGAAGGC GATGCTGCCG GGCGTGCCGG ATTTCTATCA GGGCACCGAG
ATGTGGGATA CATCGCTGGT CGATCCGGAC AACCGGCGAG CGGTGGACTT TGCCGCGCGC
AGCACGGCGC TGCACGGCCT CGAGCAGCCG GATTGGACCG ACCTCGCCGC GAACTGGCAG
GACGGCCGCA TCAAGCTGGC CTGGACACGG CAGCTGTTGA AGCTGCGCGC CGAAAAGCCC
GAACTGTTTC TCAACGGCAG CTACGAGCCG TTGCCGGTCA CCGGGCCGCA CGCCGACCGG
GTGATCGCCT TCGCCCGGCG CCATGAACGC GACGCGGTGA TCGTCGTGGT GGCAAAAGCG
ATGGCCGCGG CGACGAAGGA CGGCCGCCGC TGGCCGGCGC CCGATGCCTT CGAAGGAACG
GTGGTGGCCG AACATTACGA GGTCGATGGC GCCCCGCTGC AGCTCGCCGA ACTGTTCGCG
CAGATGCCGG TGGCGGTGCG TCCCGCGCGC TTCAAAGGCA CGTTGAGCGC CACCCGGCTG
CGCGCCACGC GCAAAGGCTG A
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| Protein sequence | MPPAIPTATY RVQLTADFGF DDAAAIVPYL KSLGITHLYA SPFLKARKGS SHGYDIVDHT
KINPELGGED GFERLSATLK QHDLGLILDF VPNHVGVHFA DNPWWLDVLE WGPASPHAAS
FDIDWDILPH RPRGGVLLPI IGSSYGEALE RGEIELRYDA ESGSLSAWYF EHRLPIAPQR
YGEVLRNVVK AAEAEQQPGG RAILELVQRS PVPRQPDRAA APAFKDALKR IPGSAAIIAR
GLEAYRAGQD RPAQTQMLHL LLERQHYKLG HWRLASSEIN YRRFFDVNSL AGLRVEDAGT
FEAIHQLVRR LIAEDKLQGL RLDHIDGLRD PAQYFQRLRR LLREARGDTA QPFYMLIEKI
LGEDESLRRF TGVHGTTGYE WMNVITQVLV DGAGLAALDE VWRQVSNTPP KFAPVLKEAK
RRVLETLLLS EFTVLSRLLA RIAAGHYSTR DFSADNLRQI LELYVLHFPV YRTYLTAAGP
TALDRELIAQ TIEKARAEWF NADEGIFDFL RDVLTLDLIK PGRAAHSKPR VRRFALKLQQ
FTGPTMAKSL EDTAFYRYHR LLALNEVGGD PSADAMSIDS FHETMRKRAI DWPHGMTATA
THDTKRGEDA RARLLALAEI PGEWSALVAK WKMLNAPHLV IKGDARTPSA PFEYMLYQAL
VGAWPLDGDP AFLDRMQAYA LKAAREGKQE TSWLNPNLDY EEGVNGFLAR ILDPAVAGDF
IAQMQTLVQR VALLGALNSL SQVTLKAMLP GVPDFYQGTE MWDTSLVDPD NRRAVDFAAR
STALHGLEQP DWTDLAANWQ DGRIKLAWTR QLLKLRAEKP ELFLNGSYEP LPVTGPHADR
VIAFARRHER DAVIVVVAKA MAAATKDGRR WPAPDAFEGT VVAEHYEVDG APLQLAELFA
QMPVAVRPAR FKGTLSATRL RATRKG
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