| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3680 |
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| Symbol | |
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| ID | 3971653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4099747 |
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| End bp | 4101897 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926790 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_533534 |
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| Protein GI | 90425164 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGA ATCTGCCCGA GGAGGCATAC GCGATTGTGG AAGGCCGCCA CGCCGACCCG
TTCCGCTATC TCGGCCCGCA TCAGGAGAAT GACCGCACCG TGGTGCGGGC GTTCCTGCCG
GAGGCTTCGA TGGTCGACGC CGTCGACGAG CATGGCGGTA CCGCAACGTT GGAGCGCGTC
CACGACGCGG GCCTGTTCGT CGGTCTATTG CCGAACGGTT CGGGTCGCTA CCAATTGCGC
GCCCGGTTCG GCGAGACCAC GGTCGATCTC GACGATCCCT ACCGGTTTCC GCCGATCCTG
ACCGACTTCG ACCTCTATCT GCTCGGCGAA GGCACCCACC AGCGGCTTTA TGACAAGCTC
GGCGCCCATC CGCTGACGCT CGACGGCGTC GACGGCATCG CCTTCGTGGT GCTGGCGCCG
AACGCGCAGC GCGTCAGCGT GGTCGGCGAT TTCAATTTCT GGAATCCGCG GCGGCATCCG
ATGCGGGTGC GCGGCAGCGG TTATTGGGAG CTGTTCGTGC CGCGCGCGCT GGCCGGCGAC
CATTACAAAT TCGACATCAT CGGCCCGCAC GGCCAGCAGC TGCCGTTGAA GTCGGACCCG
CTGGCGTTCG CCGCCGAGAT GCGCCCCGAT ACCGCCTCGG TCGTGGTCGA TCCGGCGCGG
CTGTCACATC CGCGCCCGGC GCCGCCGGCG ATCAACGCGC TGACCTCGCC GATGTCGATC
TACGAGGTGC ATCTGGGCTC CTGGCGGCGC AAGGACGACA ATCAGTGGCT GAGCTATCGC
GAGCTCGCCG AGGTGCTGCC GGCCTATGTT CGCGATCTCG GCTTCACCCA CGTCGAATTC
CTGCCGGTCA ACGAACATCC GTTCGACGGC TCCTGGGGCT ACCAGCCGAC CGGGCTGTTC
GCGCCCACCA GCCGGTTCGG CACGCCGGAG GATTTCATCG CGCTGATCGA CGCCTGCCAT
CGCGAGAACA TCGGCGTGCT GCTGGATTGG GTGCCGGGAC ATTTCCCCGA CGATCCGCAC
GGCCTGGCGA ATTTCGACGG CACCGCACTC TATGAACACG CCAACCCGTT GCAGGGCCGG
CACATGGATT GGGGCACGCT GATCTATAAT TACGGCCGCA CCGAAGTGGT GAACTTCCTG
GTCTCCAATG CGCTGTTCTG GCTGGAGCGC TACGCCGTCG ACGGGCTGCG CGTCGATGCG
GTGGCCTCGA TGCTGTATCT CGACTACAGC CGGCCGGCCG GCGGCTGGAT CCCGAACAAA
TTCGGCGGCC GCGAAAATCT CGAGGCGATC GATTTTCTGC GCCGCTTCAA CACCGAGGTC
TATGCGAAAT TCCCCCACGC CACCACCGCG GCGGAAGAAT CCACCGCCTG GCCGCAGGTG
TCGCGGCCGG TCGAATATGG CGGCCTGGGC TTCGGCTACA AGTGGAACAT GGGCTGGATG
CACGACACGC TGGACTACAT CAGCAAAGAT CCGATCTACC GCAAGCATCA CCACGGCGAG
ATCCTGTTCG GCCTGCAATA CGCCTTCTCG GAAAACTTCA TCCTGCCGCT GTCGCACGAC
GAAGTGGTGC ACGGCAAACG CTCGCTGATC GGGCGGATGC CCGGCGATGC CTGGCAGCGG
TTCGCCAATT TGCGCGCCTA TTATTCCTTC ATGTTCGCGC ATCCGGGCAA GAAGCTGATG
TTCATGGGCT GCGAATTCGC CCAGGAGCGG GAGTGGAATC ACGACCGTTC GCTGGACTGG
CATCTGCTCG AACAGCCTGA GCATCAGGGC ATCCAGGCGC TGATCCGCGA CCTCAACGGG
CTGTACCGCC GGCTGCCGGC GCTGCATCAG CTGGATTGCG ACGGCTACGG TTTCGAGTGG
ATCGTCACCG ACGACGCCGA CCGCAACGTG TTCGCCTGGA TCCGCAAGGG TAACGACGCC
CGGGCGCGCT GCCTGGTGGT GGCGAATTTC TCGCCGAGCG TGTACCACGA CTATCGCGTC
CGGGTGCCGT TCCCGGGCAA ATGGCGCGAG GTGCTGAATT CAGACTCCGC GCATTACGGC
GGCAGCAATG TCGGCAACAT CGGCGAGGTG CAGACGCTGG ATCAATTGGT CCCCGAGCTC
AGCCTCTCGC TTCCGCCGCT CGGCGTCATC TTTCTCACAC CGGAAGATTG A
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| Protein sequence | MIANLPEEAY AIVEGRHADP FRYLGPHQEN DRTVVRAFLP EASMVDAVDE HGGTATLERV
HDAGLFVGLL PNGSGRYQLR ARFGETTVDL DDPYRFPPIL TDFDLYLLGE GTHQRLYDKL
GAHPLTLDGV DGIAFVVLAP NAQRVSVVGD FNFWNPRRHP MRVRGSGYWE LFVPRALAGD
HYKFDIIGPH GQQLPLKSDP LAFAAEMRPD TASVVVDPAR LSHPRPAPPA INALTSPMSI
YEVHLGSWRR KDDNQWLSYR ELAEVLPAYV RDLGFTHVEF LPVNEHPFDG SWGYQPTGLF
APTSRFGTPE DFIALIDACH RENIGVLLDW VPGHFPDDPH GLANFDGTAL YEHANPLQGR
HMDWGTLIYN YGRTEVVNFL VSNALFWLER YAVDGLRVDA VASMLYLDYS RPAGGWIPNK
FGGRENLEAI DFLRRFNTEV YAKFPHATTA AEESTAWPQV SRPVEYGGLG FGYKWNMGWM
HDTLDYISKD PIYRKHHHGE ILFGLQYAFS ENFILPLSHD EVVHGKRSLI GRMPGDAWQR
FANLRAYYSF MFAHPGKKLM FMGCEFAQER EWNHDRSLDW HLLEQPEHQG IQALIRDLNG
LYRRLPALHQ LDCDGYGFEW IVTDDADRNV FAWIRKGNDA RARCLVVANF SPSVYHDYRV
RVPFPGKWRE VLNSDSAHYG GSNVGNIGEV QTLDQLVPEL SLSLPPLGVI FLTPED
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