| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3627 |
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| Symbol | |
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| ID | 3970642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4034522 |
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| End bp | 4035355 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926735 |
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| Product | transglutaminase-like |
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| Protein accession | YP_533481 |
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| Protein GI | 90425111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00407745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCAGATTC GGGCAGGCTA CAACATCGCG TTCCATTGCT TCCACGACAC GCCGATGAAC
CTGATGCTCA GCGTGCATCC GTCGCGGATG CAGCACATCG TCGGCGAGCA TCGCATCCGC
TTCTCGCCGC AGCTGGACAG CCGCGACACG ATCGACATGT TCGGCAATGT CTGCACCCGC
GTCGTGGCGC CTCCCGGCAA GATCGAGATC AGCAACGATT TCCTGATCGA GGATTCCGGC
CTGCCGGACC CGGTGGCCGC CGGTGCACGG CAGCTTCCCG TCGCCGAACT GCCGGACGAT
GCGTTGATCT ACCTGCTCGG CAGCCGCTAT TGCGACACCG ACAGAATGTC CAACCTCGCT
TGGTCGCTGT TCGGCGGCAT CACCTCGGGT TGGGAGCGCG TGCAGGCGAT CGTCGACTAC
GTGCACAATC GGATCTCGTT CGGCTATCAC CACGCCCGCT CCGATCGCAC CGCTTCGGAA
GGCCACGCCG AGCGCGTCGG CGTGTGCCGC GACTTCGCGC ATCTGGCGGT GACGCTGTGC
CGTTGCATGA ACATCCCGAC GCGCTATTGC ACCGGTTATC TCGGCGACAT CGGCGTGCCG
GCGGACCCTG CGCCGATGGA TTTCAGCGCC TGGTTCGAGG TCTATCTGGA CGGCCAGTGG
TACACCTTCG ACGCCCGCCA CAACCATCCG CGGATCGGAC GAATCGTGAT CGCGCGCGGC
CGCGATGCCG CCGACGTGGC GATCTCCACC AGCTTCGGCT TCGCGCAGCT GGTGAGGTTC
GAAGTGATCA CCCATGAGGT GAAGCAGGAC CAGCAATTGT CCCGCGTGGC GTGA
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| Protein sequence | MQIRAGYNIA FHCFHDTPMN LMLSVHPSRM QHIVGEHRIR FSPQLDSRDT IDMFGNVCTR
VVAPPGKIEI SNDFLIEDSG LPDPVAAGAR QLPVAELPDD ALIYLLGSRY CDTDRMSNLA
WSLFGGITSG WERVQAIVDY VHNRISFGYH HARSDRTASE GHAERVGVCR DFAHLAVTLC
RCMNIPTRYC TGYLGDIGVP ADPAPMDFSA WFEVYLDGQW YTFDARHNHP RIGRIVIARG
RDAADVAIST SFGFAQLVRF EVITHEVKQD QQLSRVA
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