| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3577 |
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| Symbol | |
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| ID | 3972816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3977503 |
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| End bp | 3980295 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926687 |
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| Product | ABC transporter related |
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| Protein accession | YP_533434 |
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| Protein GI | 90425064 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC AAACGTCCGC CGCCGGGCTG GTCGGATCGA CTCAACCCGT CGTGCGTCTT
GCCGCGGTCG ATCTTGCCTA TGGCGGCAAC CACGCGCTTC AGGGCATCAC GCTCGACGTG
CCCGCCGGTT GCATGGTCGG CTTGATTGGC CCCGATGGCG TGGGAAAGTC CAGCCTGTTG
TCGCTGATCG CAGGCGCGCG CGCCATCCAG ACTGGAACCG TGGCGGTGCT CGGCGGCGAT
ATGGCCGATA CCGCCCATCG TCGCTCGGTT TGTCCGCGGA TCGCCTACAT GCCGCAGGGG
CTCGGCAAGA ACCTCTATCC GACGCTGTCG GTATTCGACA ATGTCGATTT CTTCGGACGG
TTGTTCGGCC AGGGCAAGCA GGAGCGGGAG CGTCGAATTC GTGAACTCCT GCAAAGCACC
GGTCTGGCGG CTTTTGCAGA CCGCCCGGCG GGCAAGCTTT CGGGCGGCAT GAAGCAGAAG
CTGGGCCTGT GTTGCGCCTT GATCCACGAT CCCGATCTTC TGATCCTGGA CGAGCCCACC
ACCGGCGTTG ACCCGCTGTC ACGCCGCCAG TTCTGGGAAC TCATCGACAG AATTCGCGCC
GAACGCGCCG GCATGAGCGT CATCGTTGCG ACGGCCTACA TGGAAGAGGC CGCGCGCTTC
GATTGGCTGG CGGCGATGGA TGCTGGCCGG GTTCTCGCCA CCGGCGCTCC GGCCGAACTG
CTGAGGCAGA CCGGCGCCGC CACGCTCGAC GGCGCCTTCA TCGCGCTGCT TCCGGAGCAG
CAGCGCCGCG GCTACGCCGA GGTCGTGATT CCGCCGCGTC CCGTTGGCGT CGACGACGAC
ATTGCCATCG AAGCCGAGCA CCTCACCATG CGGTTCGATG ATTTCACCGC CGTCGATGAC
GTGAGTTTTC GGATCGGCCG TGGCGAGATC TTCGGATTTC TCGGCTCGAA CGGTTGCGGC
AAGAGCACGA CCATGAAGAT GCTGACCGGA CTGCTGCCCG CCAGTGAAGG CACGGCCAAG
CTATTTGGAC AGGAAGTCGA CCCGAACGAC ATGGCGGTGC GGCACCGCGT CGGTTACATG
TCGCAAGCGT TCTCGCTGTA TTCCGAACTC ACCGTCCGCC AGAATCTCGA TCTTCATGCG
CGGCTGTTCG GCATGCCTGT CGAAAAGATT GCGTCCCGCA TCGACGAGAT GGCGCAACGT
TTCGATCTCG CAAACTATAT TGACTCGTTG CCGGATCCCC TGCCTTTGGG AATCCGCCAA
CGGCTTTCCC TCGCCGTCGC GGTGATTCAT TCTCCTGCCA TCCTGATTCT CGACGAGCCC
ACCTCCGGCG TCGACCCGAT CGCACGCGAC GGCTTCTGGC GAATCCTGTC CGACCTGTCG
CGCACGGACA ACGTCACCAT CTTCATCTCG ACCCACTTCA TGAACGAGGC CGAGCGCTGC
GACCGGATCT CGCTGATGCA TGCCGGCAAG GTGCTGGTCA GCGATTCGCC GAAAAACATT
GTCGAAAGCC GTTCCGCCGA TTCGCTGGAA GCGGCCTTCA TTGCCTGCCT GGAAGCCGCG
ATCGGTCAAA CTGCAAGCGT TGCACCGGAT ATCGGGCCGA TTGCCGCCGC CGCCGAGAAG
AAAGCCGAAG CAGGCATGTC CGCAAAGCCA GGTGCGTGGC AGCGGTTGTT CGATCCGCGG
CGCATGTTTG CCTACACCCG CCGCGAAGCC CTTGAACTGC GCCGCGATCC GATTCGCGCC
ACGCTGGCCA CCATCGGCAG TGTCATTCTG ATGTTCGTGC TAGGTTATGG CATCAACATG
GATATCGAGA ATCTGACATT CGCAGCGCTG GACCGCGACG ACACCACGAT CAGCCGCGAC
TATATCCTGC AAATCGCCGG GTCGCGCTAC TTCAAGGAAA AGGCTCCGAT CACGGATTAT
GCCGATCTCG ATCGACGCAT GCGCAGCGGT GAGCTGAGCC TGGCGATCGA AATTCCGCCG
GGCTTCGGCC GCGACGTGGC GCGCGGGAAG AACGTCGAGA TCGGAGGCTG GATCGACGGC
GCGATGCCCA CGCGGGCGGA AACCGCGCGC GGTTATGTTC AGGCGATGCA CGCAAGCTGG
CTGACTCAGA AGGCGACAGA GCAGTATGGC GCCGCCGCCG TCGCCGGCAG CTACAACCTG
GAGATCCGTT ACCGCTATAA TCCGGACGTC AAGAGTCTGG TGGCGATGGC GCCGGCGGTG
ATCCCGCTGC TGCTGCTGTT GATACCGGCC ATGCTCGCTG TGCTCAGCGT GGTTCGCGAG
AAGGAACTCG GATCAATCGT CAATTTCTAC ACCACGCCGG TGACGCGGCT CGAATTCTTG
ATCGGCAAGC AATTGCCCTA TATCGCGCTC GGCATGCTGA ACTTCGTGTT GTTGACGGCC
TTCGCCATTT TCGTGTTCCG CGTTCCGTTC ACCGGCAGCC TGCTGGCCCT TGCGAGCGGC
GCACTGCTCT ACGTCACGAC GACGACCGCA ATGGGGTTGA TGATCTCGAT TTTCATGAGC
AGCCAGATCG CCGCGATTTT TGGAACCGCT ATCATTACTT TGATTCCTGC GATGCAATAT
TCAGGGCTGA TGGACCCGGT GTCCTCGCTG CAGGGCGCCG GCGCGTTGAT CGGGCGAATC
TATCCCACGA CCTATTTCGT CAACATCACG CGCGGCACTT TCTCAAAGGC TCTGGATTTC
GGCGACCTGT CCGGTTCGTT TGTGCCGCTG CTGATCATGA TCCCTGTGCT GCTGGGACTG
GGTTCGATGC TCCTCAAGAA GCAGGCGAAT TGA
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| Protein sequence | MTVQTSAAGL VGSTQPVVRL AAVDLAYGGN HALQGITLDV PAGCMVGLIG PDGVGKSSLL
SLIAGARAIQ TGTVAVLGGD MADTAHRRSV CPRIAYMPQG LGKNLYPTLS VFDNVDFFGR
LFGQGKQERE RRIRELLQST GLAAFADRPA GKLSGGMKQK LGLCCALIHD PDLLILDEPT
TGVDPLSRRQ FWELIDRIRA ERAGMSVIVA TAYMEEAARF DWLAAMDAGR VLATGAPAEL
LRQTGAATLD GAFIALLPEQ QRRGYAEVVI PPRPVGVDDD IAIEAEHLTM RFDDFTAVDD
VSFRIGRGEI FGFLGSNGCG KSTTMKMLTG LLPASEGTAK LFGQEVDPND MAVRHRVGYM
SQAFSLYSEL TVRQNLDLHA RLFGMPVEKI ASRIDEMAQR FDLANYIDSL PDPLPLGIRQ
RLSLAVAVIH SPAILILDEP TSGVDPIARD GFWRILSDLS RTDNVTIFIS THFMNEAERC
DRISLMHAGK VLVSDSPKNI VESRSADSLE AAFIACLEAA IGQTASVAPD IGPIAAAAEK
KAEAGMSAKP GAWQRLFDPR RMFAYTRREA LELRRDPIRA TLATIGSVIL MFVLGYGINM
DIENLTFAAL DRDDTTISRD YILQIAGSRY FKEKAPITDY ADLDRRMRSG ELSLAIEIPP
GFGRDVARGK NVEIGGWIDG AMPTRAETAR GYVQAMHASW LTQKATEQYG AAAVAGSYNL
EIRYRYNPDV KSLVAMAPAV IPLLLLLIPA MLAVLSVVRE KELGSIVNFY TTPVTRLEFL
IGKQLPYIAL GMLNFVLLTA FAIFVFRVPF TGSLLALASG ALLYVTTTTA MGLMISIFMS
SQIAAIFGTA IITLIPAMQY SGLMDPVSSL QGAGALIGRI YPTTYFVNIT RGTFSKALDF
GDLSGSFVPL LIMIPVLLGL GSMLLKKQAN
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