| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3543 |
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| Symbol | |
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| ID | 3973950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3937108 |
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| End bp | 3939195 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926654 |
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| Product | SMC protein-like |
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| Protein accession | YP_533401 |
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| Protein GI | 90425031 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.429688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATATCT CAGAGATTAG GATCGAGAAT TTCCGGCTGT TCGGGGTGGG CAATGATACC
TTCGTGCTCC GGCTTAAGCC GGGCCTGACG GCGCTCGTCG GGGAGAACGA CGGGGGCAAG
ACGGCCGTCA TCGACGCACT GCGGCTCGTG CTCGGCACCC GCGATCAGGA ACTGATTCGC
GTCGAGGCTA CGGACTTCCA TCAGGCGCCT GGCGGAGCGC AGGCAGAGCA GATTTGCATT
CGCCTGACCT TCAAGGCGCT GACGGTCCAT GACCGCGCCG CGTTCGCCGA ATATCTGACT
TATCTTCCAG GCGGCGACGT CACCGAGACC GCGCTAATCA TCACATGGAA TGCTCGGCGC
AATACGAAGG AAGGCGTCTC CCGCCGTACG CTACCCTCGG AGATCCGCAC CGGCGCGGCC
GGTGACGGCC CCGTACTAGA GGGAGCGGCC CGCGCGCTCT TGACCGCGAC GTATCTGCGA
CCGCTGCGCG ATGCTGAAAG GGCGATGAGC GCGGGCCGCG GTTCGCGCCT TTCGCAGATC
CTCCAGCACA CCAAGGAGAT CAAGGAGACG GGTGTCGCCT TCGATCCGAA GGCGAGCCCG
CCGGCCGACC CTGCGAAGCT CAGCGTACTC GGCGTCGGCG ACTACGCGAG CTTCCTCTTC
GACGGCAGCG CCGGGATCAA GGAAGCACGC AAGAAGCTGA ACGACGAGTT CCTGAAACCG
CTCTCGTTCG CGAACGACCT CCTGAACGCC CGCATCGCGG TCAGCGGCAG CCGGGACGAC
GCCGTGCGGC TTCGCCAGCT CCTTGAGAAG CTCGAGCTCG CCCTCAGCGC ATCCGATGAC
ACTGACGCTT CATATACGCG CGGCCTCGGG TCAAACAATC TGCTGTTCAT GGCTTGCGAA
CTGCTGCTGC TCGCCGCCGA AAGCGACGGC TTCCCGCTTC TACTGATCGA AGAGCCTGAA
GCGCATTTGC ATCCGCAGCG GCAACTCCGT CTCATGTCGT TCCTTCAGGA GCAGGCCGAC
GGGGTCCGCG CCGATGGCCA GCAGATACAG ATCCTCGTCA CGACTCACAG CCCAAACCTG
GCCTCCGATA TCCGCCTTGA GAACCTCGTC ATGATCGAGG GCAGGAAAGC CTTCCCTATG
GGGCCGGAGC ACACGCAGCT CAGCGCCTCA GATTACCGCT TTCTTGAGCG GTTTCTCGAC
GTGACCAAGG CGAATCTCTT CTTCGCTCGC GCCGTGATGA TCGTGGAAGG TGACTCCGAG
ACGATCCTGC TCCCAGTCAT CGCTCGCCTG CTCGACCGAG ATTTCCACCG CTACGGCGTT
TCCCTCGTAA ATGTCGGCGG TGTCGGCCTC GGCCGCTTCG CACGCATCTT CATGCGGAAG
CGTCCAGAGG AGTCAGGTGT CATCAGCGTG CCTGTGGCGT GCGTTACCGA TCTCGACGTG
ATGCCGGACG ATGCGCCATG GATTGTCGGT AAGCTGAAGG ACGGCGAGGA CGTTCCCGAG
ATCAAGAAGG GCGGCCGCCA GTGGCGGCGG AAGGCGGACT TCCCCGGCGC CAAACTGGAT
GAACGCCGGA AGGAGCGCCG CGATAAGGCG TCGGGCCAGA AGGTTAAGAC CTTCGTTGCC
GGAGACTGGA CCCTCGAATT CGACTTGGCG CTCCACGGAA TGCGCCCGCA GGTTTGGCTC
GCTGCGCACA TGGCGTTCGC TGACGACGAA CTTGTCAACG GGAAGACGAC TAAGAAGGCC
GTGATCGAAG AGTCTGTGCC GGCCTTCAAG GAACTTATTA GAGGGGGGCT CAGCTCTGAG
ACCTTCGCCT CTCACGTCTA CGCGCTCTTC GAAGGGGACA AGGCATCGAA GGCGATTGCG
GCTCAGTATC TTGCCGGAAT TCTTGAGGGC CTCGTTGAAA GCAAGAAGTG GAATTCTGCG
GACCTCCTGA AGAAGCTCCC ATCCTATATC GTGCAGGCGA TCGAACACGT CACCGAGCCG
TTCTCCACGG CGAAAAAGCC CGCTGAAACA GGGCCCAAGG ATGAGGGGCC TAGTGAGACC
GAGGCTGGAG GCTCGGGTGA TGAACCTGAA GAAGACGCGA GCGTATGA
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| Protein sequence | MYISEIRIEN FRLFGVGNDT FVLRLKPGLT ALVGENDGGK TAVIDALRLV LGTRDQELIR
VEATDFHQAP GGAQAEQICI RLTFKALTVH DRAAFAEYLT YLPGGDVTET ALIITWNARR
NTKEGVSRRT LPSEIRTGAA GDGPVLEGAA RALLTATYLR PLRDAERAMS AGRGSRLSQI
LQHTKEIKET GVAFDPKASP PADPAKLSVL GVGDYASFLF DGSAGIKEAR KKLNDEFLKP
LSFANDLLNA RIAVSGSRDD AVRLRQLLEK LELALSASDD TDASYTRGLG SNNLLFMACE
LLLLAAESDG FPLLLIEEPE AHLHPQRQLR LMSFLQEQAD GVRADGQQIQ ILVTTHSPNL
ASDIRLENLV MIEGRKAFPM GPEHTQLSAS DYRFLERFLD VTKANLFFAR AVMIVEGDSE
TILLPVIARL LDRDFHRYGV SLVNVGGVGL GRFARIFMRK RPEESGVISV PVACVTDLDV
MPDDAPWIVG KLKDGEDVPE IKKGGRQWRR KADFPGAKLD ERRKERRDKA SGQKVKTFVA
GDWTLEFDLA LHGMRPQVWL AAHMAFADDE LVNGKTTKKA VIEESVPAFK ELIRGGLSSE
TFASHVYALF EGDKASKAIA AQYLAGILEG LVESKKWNSA DLLKKLPSYI VQAIEHVTEP
FSTAKKPAET GPKDEGPSET EAGGSGDEPE EDASV
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