Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3529 |
Symbol | |
ID | 3973897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3923391 |
End bp | 3924608 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637926640 |
Product | signal transduction histidine kinase |
Protein accession | YP_533387 |
Protein GI | 90425017 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.170223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCG AACCGAGGCC CTCGTCCGGG GCCGCCTATG ATGAAATCCG TCAGGATGAG CTTCCGTATC GCCGCCGCCA ACAGGCCATT CTTCGGGAGT TTGGAACCGT CGCGTTACAG ACCCGTGACT TCCGACACAT CCTTCAGCAA GCGACCGAAC TAAGCGCCCG TGGCCTAGGG TGTTCGTATG CGAAGGTCCT GGAATATCTT CCGAATGAGC AGCGCTTGAT CGTGCGTGCA GGCATCGGCT GGCCGGCGGG TACAGTGGAC CACGTATCGC TCGGCGCGGA TATTGAGTCT CCAGCCGGCT TTGCCTTTCA GACCGGCCAA TCGGTCATAT CCAATCATTT GCAGGCAGAA ACGCGCTTCC GAACACCCGC ACTTTTGGCC GAACAAGGCA TTAAACGCGC GATCAACGTC ATCATCCGAC GAGGTGGTGA GGGTAATACA CCGTTCGGTG TCCTCGAAGC TGATAGTCCG GATTCTGGCC AATTCGACGA CGCGGACGCG GATTTCTTGG CGGGTTTTGC CGGCCTGCTC GGCATTGCGA TTGAGCGTCA GCATGCAGAC GCCGAGCTGC AGGACGCCCT CGACAAACTA CAGCAAGCGC TCGATCACGA GGCACTATTG ACGCGTGAGA TGAGTCACCG CGTTAAGAAC AGTTTGACCT CGGTCGTCGG ACTTCTGCGA GTCCAGGCAC GCGGCTCAGA TTCCGTCGAT GTGAAGAACG CGTTGGAAAA CGCTGCGATG CGTGTTGCGT CTATCGCGGA GGTTCACGAC CATCTGTGGC GAGGTAGCAA GGTTGGATTT GTCGACCTCT CCGATTTTGT GGGACACCTA TGCAAGAATC TCCAGAATTC TGCACCGGAA CACTCGATAC AATGTTATTC GGACTCAATT ATCATCTCAG CCGACAAGGC AATTCCGTTA GGGCTGCTCG TCAACGAATT GGTGACGAAC GCCGTCAAAT ACGCTTACGT CGATGGACCT GGTGTGATCA GGGTCGATGC GCGAGAAATT AACGGGCATC TGATTATTGA GATTTCCGAC GAAGGCCTGG GCCTGCCTGA TGGATTTGAT ATCAATCATC CACGGAAGAC GCTTGGCTTC CGAGTTATCA ATGGCTTGGT CCGCCAATTG GTTGGCGAAC TAAACATTTC AAAAAACATA CCAAGGGGAT CGCTATTCAC GATAAAATTC TCGCTCGATC CCCACTAG
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Protein sequence | MPSEPRPSSG AAYDEIRQDE LPYRRRQQAI LREFGTVALQ TRDFRHILQQ ATELSARGLG CSYAKVLEYL PNEQRLIVRA GIGWPAGTVD HVSLGADIES PAGFAFQTGQ SVISNHLQAE TRFRTPALLA EQGIKRAINV IIRRGGEGNT PFGVLEADSP DSGQFDDADA DFLAGFAGLL GIAIERQHAD AELQDALDKL QQALDHEALL TREMSHRVKN SLTSVVGLLR VQARGSDSVD VKNALENAAM RVASIAEVHD HLWRGSKVGF VDLSDFVGHL CKNLQNSAPE HSIQCYSDSI IISADKAIPL GLLVNELVTN AVKYAYVDGP GVIRVDAREI NGHLIIEISD EGLGLPDGFD INHPRKTLGF RVINGLVRQL VGELNISKNI PRGSLFTIKF SLDPH
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