| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3523 |
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| Symbol | |
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| ID | 3973891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3916477 |
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| End bp | 3917835 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637926634 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_533381 |
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| Protein GI | 90425011 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.101344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTGA GCCAGCTCTC CATCAGTACC AAGATCACCG CCGTGATCAC ATTCCTAATC
TTCTCAATGG CGGGAATCGG GCTGGTAGGG CTTCTCAAGA TGCGGGCAAT CAACGCCGAC
GCGGCGGCTA TTCAGCGCAT TTGGTTGCCC AGCGTGCGCG CTCTCGGAGA ACTCCGCTCA
AACGTTATCG TCTGCCGCAA TATCATCCGA CAGCACCAAC TGTCCGACAC CGTCGAGGCC
AAACAGGCTG CGGAAGTGTT GTTGGACGCT GCCGTCAAAA CAAACGACGA GGCGCGCATT
AGCTATGAAG CCCTGCTTGG ATCACCGACG GAACGTGTGC TGTATGCCGA GTGGGTGAAA
ACTTGGGAGG CCTATCTACA GGGCGCGCGA CAAGTATTAA CTCTATCCCG CAACAGCGGC
GGTATTGCAT CTTTGGAGAC GCGCAAACTC AACATGGATA CCGTCGGTCC GATCGGAGAC
AGGGCCGACG AAATCCTTAA GAAGAGCATC GACTTCAATA ATCAGGGAGC CGATGCCGCC
GGCCAGGAGG CTGTCAAGAG TTACCAGTCG GCGGTCGTTT CGCTGGCGAC GTTTCTGACG
ATAGCCGTTG TGATCGGTGG TGTTGCCGGC ATTTATATCG TCCGCCATGT CGGCTCCGCC
ATCGCCTCCA ATGTCACGAC AATGCACGAG TTGGCCGCGG GACACCTCGA TGTCGTGGTG
CCTCACCAAG GCGAAAATAA CGAAATCGGA ACGATGGCGG ACGCGTTGCA GCACTTCAAG
CTGGCTCTCA TCGCGAAGAA GGCCGACGAC GACGACGCGG CGGCAGAGTT ACGTGATCGT
GCAAGACGGC TCGCGGTCCT GGCTACCACC GATCGCCTTA CCGGTCTTTA CAATCGACTG
AAGTTCGATG AAGCGCTGGT CGCCGAGATC GCGCGAGCGG AACGCTTCAG GATGCCATTC
TCGTTGGTAA TTTACGACGT TGATCACTTC AAGGTGGTGA ACGATGCGTT CGGACACCCG
ATCGGAGACA GCGTCCTCGC CGGCTTATCC GATGTGGTCT CAAGCCAGCT TCGGGCGACC
GATACTTTAG CCCGATGGGG AGGCGAAGAA TTCGCGATCC TGGTGACTGG TTCTGACGGC
TGCTTCGTTG CAGAGAAGTT GCGAACTGCT ATCGCGGGGG TTTCCTTTGA TCGGGTTGGG
GGTGTCACCT GCAGCTTTGG CGTAACTGAA TATCTTGAGG GCGATACCCC AGAAATCATG
GTCGCCCGTG CAGATGCCGC GCTTTACCAG GCCAAGGTGA AAGGCCGCAA TCGGGTGGAA
CTCTACGCAT CGCCGGAATC TGTTTCGAGC GCTGCATAA
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| Protein sequence | MHLSQLSIST KITAVITFLI FSMAGIGLVG LLKMRAINAD AAAIQRIWLP SVRALGELRS
NVIVCRNIIR QHQLSDTVEA KQAAEVLLDA AVKTNDEARI SYEALLGSPT ERVLYAEWVK
TWEAYLQGAR QVLTLSRNSG GIASLETRKL NMDTVGPIGD RADEILKKSI DFNNQGADAA
GQEAVKSYQS AVVSLATFLT IAVVIGGVAG IYIVRHVGSA IASNVTTMHE LAAGHLDVVV
PHQGENNEIG TMADALQHFK LALIAKKADD DDAAAELRDR ARRLAVLATT DRLTGLYNRL
KFDEALVAEI ARAERFRMPF SLVIYDVDHF KVVNDAFGHP IGDSVLAGLS DVVSSQLRAT
DTLARWGGEE FAILVTGSDG CFVAEKLRTA IAGVSFDRVG GVTCSFGVTE YLEGDTPEIM
VARADAALYQ AKVKGRNRVE LYASPESVSS AA
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