Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3485 |
Symbol | |
ID | 3972852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3870693 |
End bp | 3872015 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637926597 |
Product | beta-lactamase |
Protein accession | YP_533344 |
Protein GI | 90424974 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.807296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGGTG GTGGAAACGC CAATCGGGTG CAGATGTCAC GCCGTCGCCG CCGCTTGCAT ACTGAAGGGG GACCGACCGT CGGCCTGGCC GTCCTCGCCG CCATTTTGCT GTTGCTCGGC CTCGGCCACG AGCGCGCCCG CGCGGGACCG GAGCCGCGCT TTTCCGGCAT CACGCAATAT TTCGACGGCG AGGTCGCGGC CGGCCGGTTG CCCGGCGCGG TGGTACTGAT CCAGCGCCAC GGGGTGCCGG TCTATCTGCG CTGCTTCGGC GTCCGCGAGG TCGGCAGCGG CGTGGCGATG ACGCCCGACA CGCTGTTCGC GCTGCATTCG ATGACCAAGC CGATCACCAG CTTCGCCGCG ATGCTGCTGA TCGACGCCGG CCGCCTCGCG CTCGCCGATC CAGTGGCGAA ATTCATCCCG GCGTTCGCCG CGGTCGAGGT CGGCGTCGAG ACCGTCGATG CGGCGGGCCA TCCGGTGCTG CAGCGGGTGC CGCCAAAGCG TCCCGTGACG ATCGCCGATC TGTTGCGCCA CACCTCGGGC ATCACCTACG GCTATATCGG CGGCGACTTG ATCAAACAGG CCTATGCGGA CGGCCATCTG TTCGATGGCG CGTTCGACAA CGCCACCTTC GCCGAGCGCA TCGCCCGGCT GCCATTGGCG CGGCAGCCCG GCACGCTGTG GCGCTACGGC CATTCCACCG ACGTGCTCGG CCGCGTCATC GAGATCGTCT CCGGGCAGCC GCTCGGCGAG TTCTTGCAGC AGCGGATTTT CGCGCCGCTC GGCATGACCA GCACCAGCTT CGGGATGAGC GATCCGGCCG ACCGCGCGCG GATGGCGGAG CCGTTGCCGG GCGACGGCAT CCTGCAACGC TCCGAAGCGA TGCGCCGCGC CCATCCGGAA TGGCAGTCCG GCGGCGGCGG GCTGGTTTCC ACCGCGCCGG ACTACGCCCG CTTCGCGCAG ATGCTGCTCG ATGGCGGCGT GTGGGACGGC CGCCGTCTGA TCAGCGAGGC CGCCTTCAAG GCGATGACCA GCGACCAGAT CGGGCCTGGC TCCGGCGTGG CGCGCGACTT CTTCTATTTC CCCGGCGATG GCTTCGGCTT CGGCTACGGC CTCGCGGTCC GGGTCGAGCC CGGCACCGCG CGGCCGCCGC CGCCGGGCTC GCTCGGCGAA TTGAAATGGG ACAGCGGCAG CGGCACCTTG TTCGGCGTCG ACCCCAAGCT CGACATGGTG TTCGTCTTGA TGCAGCAGAC CCAGGCCGAA CGCGGCAAGA ACACCGTGGC GTTCAAGAAG CTGCTGTATG ACGCGGTGCT GGCGCAGCCG TAA
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Protein sequence | MVGGGNANRV QMSRRRRRLH TEGGPTVGLA VLAAILLLLG LGHERARAGP EPRFSGITQY FDGEVAAGRL PGAVVLIQRH GVPVYLRCFG VREVGSGVAM TPDTLFALHS MTKPITSFAA MLLIDAGRLA LADPVAKFIP AFAAVEVGVE TVDAAGHPVL QRVPPKRPVT IADLLRHTSG ITYGYIGGDL IKQAYADGHL FDGAFDNATF AERIARLPLA RQPGTLWRYG HSTDVLGRVI EIVSGQPLGE FLQQRIFAPL GMTSTSFGMS DPADRARMAE PLPGDGILQR SEAMRRAHPE WQSGGGGLVS TAPDYARFAQ MLLDGGVWDG RRLISEAAFK AMTSDQIGPG SGVARDFFYF PGDGFGFGYG LAVRVEPGTA RPPPPGSLGE LKWDSGSGTL FGVDPKLDMV FVLMQQTQAE RGKNTVAFKK LLYDAVLAQP
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