| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3480 |
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| Symbol | |
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| ID | 3972847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3865443 |
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| End bp | 3866288 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926592 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_533339 |
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| Protein GI | 90424969 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTG CAATTCCGCG ATGCGGCAAA CGCCGCGCGC CAACAAAAAG GGAGATCCGC
ATGGGCCGCC TGGAGGGCAA ATCTGTCATC ATCACTGGCG CCGGCAGCGG CATCGGCCGC
GCCGCAGCGC TGCTATTCAC CAAAGAGGGC GCACAGCTGA TCGCGGTGGA TCGCTCCGAC
GCCGTGCACG ACACCGTCGA GCTGGTGCAC CGGCAGGGCG GCACCGCCGA AGCCGTGGTC
GCCGATGCCG GCTGCGAGCG CGACGTCAAA GCCTTCGTCG CCAAGGCGGT GGCGACCCAT
GGCCGGCTCG ACGCGATCTG GGCCAATGCC GGGGTCAGCG GCGGCCTGGT GCCGCTCGAG
GAGCAGACCG TCGAGCACTG GCAGGAGGTG CTGCGGATCA ACCTGATCGG GCCGTTCCTG
GCGATCAAGC ACGCCATGCC GCAGATGATC GCGCAGGAGT CCGGCGCGAT CGTCTTGACC
GCCTCGGTCG CCGGGCTCAA GGCCGGCGCC TCGGGGCATC CTTACGCGGC CTCAAAAGCC
GGGGTGATCA GCCTGGTGCA GACCACGGCC TATTCGCTGT CCGGCACCGG GGTGCGGATC
AACGCGGTGT GCCCCGGGCT GATCGAGACC GGAATGACCC AGCCGGTGTT CGACCACGCC
CGCGCGCGCG GCACCGCGCA CAAGATCGGC CAGATCAACC CGCTGAAGCG CGCCGGCCAG
CCGCACGAAC TCGCCGCGAT GGGGCTGTTC CTGGCGAGCG ACGAGGCGTC CTACGTCAAC
GGCCAGGCGA TCGCGGTCGA CGGCGGCTTG ACCGCGTCGA TGCCTTATGT GGGCAAGCCG
ATTTGA
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| Protein sequence | MRIAIPRCGK RRAPTKREIR MGRLEGKSVI ITGAGSGIGR AAALLFTKEG AQLIAVDRSD
AVHDTVELVH RQGGTAEAVV ADAGCERDVK AFVAKAVATH GRLDAIWANA GVSGGLVPLE
EQTVEHWQEV LRINLIGPFL AIKHAMPQMI AQESGAIVLT ASVAGLKAGA SGHPYAASKA
GVISLVQTTA YSLSGTGVRI NAVCPGLIET GMTQPVFDHA RARGTAHKIG QINPLKRAGQ
PHELAAMGLF LASDEASYVN GQAIAVDGGL TASMPYVGKP I
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