Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3470 |
Symbol | |
ID | 3971755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3854333 |
End bp | 3855295 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637926581 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_533329 |
Protein GI | 90424959 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGCA AGGTTCTGAT CTATTCCCCG TTCTCGAAAG CGATGCTGAC GCGGATCGCC GCGCGCTTCG AGCTGATCGA CGCCGAAGGC AAACTGCCGC GCGAGGCGTT CAGCGCCGAC GAGCTCGGTG ACGTTCGCGC GGTGATCACC GCCGGCGCCG AGCCGCTCGG CCGCGCGGTG ATGCAGAGCC TGCCGAAGCT CGGCGCGATC GTCTGCTACG GCACCGGCTT TGACGGCATC GACCGCGCCG CCGCGGCCGA GCGCGGCATC GTGATCGGCC ACAGCCCGGC GGCCAATGCG GCGGCGGTCG CGGACCTGGC GATGACGCTG CTGCTGGCGG TGACACGGCA GTTACTTCCG GCCGACGCTT ACATCCGCAG CGGCGGCTGG GCGGCGGGGC AGCCGTCGCT GCGGTTGGCG CCGCCACGCG GAATGACCGG CCGCCGCGTC GGCGTCTACG GCATGGGCGA GATCGGCCGC AAGATCGCGG CGCGTGCCGC TGCGTTCGAG ACCGAGGTCG GTTACTACAG CCGCTCGCAG CACGACGTGC CTTATACTTA TCATGCGAGC CTGGAAGCGC TGGTCGAGTG GTGCGACGTG CTGATGATCG CGGTGCGCGC CGGCCCCGCG ACACGGCACA TCATCGACGC CGCGATGCTG CAGCGGCTCG GCCAGGGCGG CATCGTGATC AACATCTCCC GCGGCTCGGT GATCGATCAG GCCGCATTGC TGGCGGCGCT GCAGGATCAC GCCATCGCCG GCGCCGGGCT CGACGTGTTC GAGGTCGAGC CGCTCGCGCC GGGTGCGCTC AGTGCCTTGT CCAACGTGGT GCTGACCCCG CATCTCGGCG GCCACACCGC CGAATCCCAC ATCGCGATGC AGGACTGCGT GATCGGAAAC CTCGCGGCGT TCTTTGCCGG GCGGCCGCTG CCGCATCAGG TTGAGCTGGC GGCGCGCGCG TAA
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Protein sequence | MDGKVLIYSP FSKAMLTRIA ARFELIDAEG KLPREAFSAD ELGDVRAVIT AGAEPLGRAV MQSLPKLGAI VCYGTGFDGI DRAAAAERGI VIGHSPAANA AAVADLAMTL LLAVTRQLLP ADAYIRSGGW AAGQPSLRLA PPRGMTGRRV GVYGMGEIGR KIAARAAAFE TEVGYYSRSQ HDVPYTYHAS LEALVEWCDV LMIAVRAGPA TRHIIDAAML QRLGQGGIVI NISRGSVIDQ AALLAALQDH AIAGAGLDVF EVEPLAPGAL SALSNVVLTP HLGGHTAESH IAMQDCVIGN LAAFFAGRPL PHQVELAARA
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