Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3448 |
Symbol | rplC |
ID | 3972116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3823814 |
End bp | 3824545 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637926559 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_533307 |
Protein GI | 90424937 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.925386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCCG GAGTGATCGC ACAAAAGGTC GGGATGACGC GGGTCTTTAC AGAGACCGGC GAACATATCC CAGTGACCGT GCTCAAGCTG GGCAATTGCC AGGTATTGGG TCATCGCACC ACCGAGAAGA ACGGCTACGT CGCTATGCAG CTCGGTTCGG GCACGCGGAA GACCGTTTAT CTGCCGAAGG CGGAACGCGG CCAGTTCGCG GTCGCCAAGG TCGAGCCGAA GCGTAAGGTC GCGGAATTCC GCGTGTCGGA AGACGCGCTG ATCCCGGTCG GCGCCGAAAT TCAGGCCGAC CATTTCGTGG TCGGGCAGTT CGTCGACGTC ACCGGCACCT CGGTCGGTAA GGGCTTCGCC GGCGGCATCA AGCGCTGGAA TTTCGGCGGC TTGCGCGCCA CCCACGGCGT CTCGGTGTCG CATCGTTCGA TCGGTTCGAC CGGCGGCCGG CAAGATCCCG GCAAGACCTT CAAGAACAAG AAGATGCCCG GTCATATGGG TGTCGATCGC ATCACCACGC TGAATTTGCG CGTGGTCCAG ACCGACGTTG CGCGCGGCCT GATCCTCGTC GAAGGCGCCG TTCCCGGCTC CAAGGGCGGA TGGATCGCGG TGCGTGACGC GGTGAAAAAG GTGTTGCCGG CGGATGCGCC GAAGCCTGGC AAGTTCCGCC TGGCTGATGG CGGAGGCGAG CAGACTGCCG CTGCGCCTGC CGCCGAGCAG GAGGGCGTGT GA
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Protein sequence | MRSGVIAQKV GMTRVFTETG EHIPVTVLKL GNCQVLGHRT TEKNGYVAMQ LGSGTRKTVY LPKAERGQFA VAKVEPKRKV AEFRVSEDAL IPVGAEIQAD HFVVGQFVDV TGTSVGKGFA GGIKRWNFGG LRATHGVSVS HRSIGSTGGR QDPGKTFKNK KMPGHMGVDR ITTLNLRVVQ TDVARGLILV EGAVPGSKGG WIAVRDAVKK VLPADAPKPG KFRLADGGGE QTAAAPAAEQ EGV
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