Gene RPC_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3426 
SymbolrpsM 
ID3970181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3812329 
End bp3812697 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content60% 
IMG OID637926537 
Product30S ribosomal protein S13 
Protein accessionYP_533285 
Protein GI162136028 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.968346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.190487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGTA TAGCCGGCGT GAACATTCCG ACCAACAAGC GCGTCCTGAT CGCGCTGCAG 
TATATCCATG GCATCGGCCA GAAGAACGCG GCCGAAATCC TGGAGAAGGT CAAGATCGCT
GATGACAAGC GCGTCAATCA GCTGAGCGAC CAGGAAGTCT TGCAGATCCG CGAAGTGATC
GACCGCGACT ATATGGTCGA GGGCGATCTT CGTCGCGAGA CCGGCATGAA CATCAAGCGG
TTGATGGATC TCGGCTGCTA TCGCGGCCTG CGCCATCGTC GCGGTCTGCC GGTGCGCGGT
CAGCGCACCC ATACCAATGC GCGCACCCGC AAGGGTCCGG CGAAGTCGAT CGCCGGCAAG
AAGAAGTAA
 
Protein sequence
MARIAGVNIP TNKRVLIALQ YIHGIGQKNA AEILEKVKIA DDKRVNQLSD QEVLQIREVI 
DRDYMVEGDL RRETGMNIKR LMDLGCYRGL RHRRGLPVRG QRTHTNARTR KGPAKSIAGK
KK