| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3372 |
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| Symbol | |
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| ID | 3970532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3746759 |
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| End bp | 3749824 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926484 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_533232 |
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| Protein GI | 90424862 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATCA CCGACCTCTT CGTCCGACGC CCGGTGCTCT CGCTGGTGGT GAGCGCGCTG
ATCCTGGTGA TCGGCCTGCG CGCGATGTTC TCGCTGCCGA TCCTGCAATA TCCGCAGATG
CAGAACGGCG TGGTGACGAT CACCACCACC TATGCGGGCG CCGATTCCGA CATCATCGCG
GGCTTCATCA CCTCGCCGCT GGAGAATGTG ATCGCCCAGG CCAACGGCAT CGACACCATG
ACCTCGTCGA GCCAGACCGG GGTCAGCGCG ATCACCGTGC ATCTGCGGCT GAACTACGAC
AGCGGCAATG CCCTCACCGA GATCAGCACC AAGGTGAGCT CGGTGCTGAA TCAGTTGCCG
GCCGGCACCC AGCAGCCGAT CCTGGCTCTG AAGATGGGTG CCACCATCGA TGCGATGTAC
ATCGCGTTCT CCAGCACGGT GCTCGCCGAG AACGAGGTGA CGGATTACGT CGCCCGCGTG
GTGCAGCCCA AGCTGCAGGC GGTGGCCGGC GTGCAGGTGG CGGAAATCCT CGGCGGCAAG
AATTTCGCGC TGCGCGCCTG GCTCGATCCG GACAAGATGG CCTCGCTCGG CCTCACCGCC
ACCGACGTGG CGACCGCGCT CAAGACCAAC GACTACATCT CCGGCGTCGG CACCACCAAG
GGTCGGCTGG TTCAGGTCAA ACTGTCCGCC GCCACCAACA TGCAGTCGGT GCAGGCGTTT
CGCGAACTCA TCATCAAGAC CGTCGATGGC GCCATGATCC GCCTGCAGGA CGTGGCGAAC
GTCACGCTGG GCAGCGACGA CTACGACTCC CGGACCAGCT TCAACGGCAA GTCCGCGGTC
TATATCGGCA TCCAGGTCGC CCCCTCGGCC AATCTGCTCG ATGTGATCGA GGGCGTGCGG
CAGACGCTGC CCGGCATCAT CTCGGACCTG CCCAGCGGCC TGTCCGGCAC CGTGCTTTAC
GACGCCACGC AGTTCGTCAA CACCTCGATC CGGGAGGTGG TGATCTCGCT GTTCGAGGCG
GCGCTGATCG TCACCCTGGT GGTCTTTGCG TTCCTCGGAT CATGGCGCTC GGTGTTCATC
CCGATCGTCG CCATCCCGCT GTCGCTGATC GGCAGCTTCG CGCTGATGCT GGTGCTCGGC
TTCTCCATCA ATCTGCTGAC GCTGCTGGCC CTGGTGCTCG CCATCGGTCT GGTGGTGGAC
GACGCCATCA TCGTCGTGGA GGGCGTCAAC CGCCACATGG AGCTGGGTCT GAAGCCGATC
GACGCCGCGA TCACCGCGGC GCGCGAACTG TCCGGTCCGA TCATCGCGAT GACCGCCGTG
CTGATCGCGG TCTATGTGCC GGTCGGTTTC CAGGGCGGTC TGACCGGCTC GCTGTTCACC
GAATTCGCCT TCACGCTGGT GGCGGCGGTG CTGGTGTCGG CGGTGGTGGC GCTGACGCTG
TCGCCGATGA GCTGCGGCTA TCTGCTGGCG CCGCACGATC CGTCGGCGCG CACGCTGGAG
GCCCGCATGG TGCGCGGCAT CGACCGCGTC ATGACGTCCG TCACCGGGGC CTATCGCATC
GCGCTGACCG CCTCGCTGCG ACTGTTGCCG CTGACCATCC TGTTCGGCGC CGTGGTGCTG
GCGAGCATCA CCTGGCTGTA TTCCCACTCG ACCTCGCAGC TCGCGCCGCC GGAGGACCAG
GGGGTGATCC TGACCATGAT GTCGGCGGCG CCGAACGCCA CGCTGGAGCA GCGCGAAACC
TATGTGCAGC AGATCTACGG CATTCTCGAC AAGCGGCCGG AGACCGACCT CGTGTTCCAG
ATCGACATGC CCGGTCAGGT GATCGGCGGC TGGGTGCTGA AACCCTGGGA CCAGCGCAGC
CAGTCGGCCC TGGCCCTCGC TCCCTTGATC CAGCAGCAGT TCAACAAGAT CGCCGGGGTG
CGGGTGGCCG CGTTCCAGTT GCCGCCGCTG CCGGGCAGCA GCGGGCTGCC GATCCAGTTC
GTGCTGAAAT CCAACGATTC CTATGCGCGG CTCTATCAGG CGTCGGAGAA CTTCCTCAGC
GAAGCCATGA AGAGCGGCAA GTTCATCTTT CTCGATGGCG ACATGAAGAT CGACCAGCCG
CACGCCAGCA TCCATTTCGA CCGCGACAAG GTGGCGTCGC TCGGCCTGAC CATGACTGAC
GTCGGCGCCG CGATGTCGAC CATGCTGGGC GGCAGTTACG CGAATTATTT CGACCTCGGC
GGACGATCAT ATAAAGTCAT CCCGCAGGTG ATGCAGCAGC ATCGGCTCAA TACCGATCAA
TTGCTCAATT ACTACATCCG GGCCGCGGAT GGCACGTCGG TCCCGCTCTC CACCATCGCC
CGGATCGAGA TGAAGACCGT GCCGCAGTCG CTCAACCATT TCCAGCAGCT CAACGCCTCG
ACCATCTCCG GCATCGCCAT GCCGGGCGTG TCGGACGGCG ATGCGCTGGC CGAGTTGCGG
GCGGTTGCCG CCCGGGCGCT GCCGTCGGGA TACAGTTACG ACTATGCCGG GTCGTCACGG
CAGCTGGAGA ACGAATCCAA CGGCTTCGTC ACCACCTTCG CGCTGGCACT CTTGATCATC
TTCCTGGTGC TGGCGGCGCT GTTCAACAGC TTCCGCGATC CGCTGGTGAT CCTGGTCTCG
GTGCCGATGT CGCTCGCCGG CGCGCTGTTC TTCATCTGGC TCGGCGTCGG CGGCGCCAGC
ATCAACATCT ACACCCAGGT CGGGCTGGTG ACGCTGATGG GGCTGGTCAG CAAACACGGC
ATCCTGATGG TGGAGGTGGC CAACACTTTG CGCCAGGAAG GCCGCAGCAA GCACGACGCC
ATCATCGAGG CGGCCAGCAT CCGGCTGCGC GCGATCATGA TGACGACGGC CGCGATGGTG
CTGGGCGTGA CGCCGCTGAT CGTCGCCACC GGCGCCGGCG CCAATTCGCG CTTCAACATG
GGCCTGGTGA TCGCCACCGG CCTGGCGATC GGCACGCTGT TCACCCTGTT CGTGGTGCCG
GCGTTCTATC TGCTGCTCAG CCACCGCGAC CAGACCGAGC CGGCGCCGGC CGTGGCGTCG
GCCTGA
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| Protein sequence | MPITDLFVRR PVLSLVVSAL ILVIGLRAMF SLPILQYPQM QNGVVTITTT YAGADSDIIA
GFITSPLENV IAQANGIDTM TSSSQTGVSA ITVHLRLNYD SGNALTEIST KVSSVLNQLP
AGTQQPILAL KMGATIDAMY IAFSSTVLAE NEVTDYVARV VQPKLQAVAG VQVAEILGGK
NFALRAWLDP DKMASLGLTA TDVATALKTN DYISGVGTTK GRLVQVKLSA ATNMQSVQAF
RELIIKTVDG AMIRLQDVAN VTLGSDDYDS RTSFNGKSAV YIGIQVAPSA NLLDVIEGVR
QTLPGIISDL PSGLSGTVLY DATQFVNTSI REVVISLFEA ALIVTLVVFA FLGSWRSVFI
PIVAIPLSLI GSFALMLVLG FSINLLTLLA LVLAIGLVVD DAIIVVEGVN RHMELGLKPI
DAAITAAREL SGPIIAMTAV LIAVYVPVGF QGGLTGSLFT EFAFTLVAAV LVSAVVALTL
SPMSCGYLLA PHDPSARTLE ARMVRGIDRV MTSVTGAYRI ALTASLRLLP LTILFGAVVL
ASITWLYSHS TSQLAPPEDQ GVILTMMSAA PNATLEQRET YVQQIYGILD KRPETDLVFQ
IDMPGQVIGG WVLKPWDQRS QSALALAPLI QQQFNKIAGV RVAAFQLPPL PGSSGLPIQF
VLKSNDSYAR LYQASENFLS EAMKSGKFIF LDGDMKIDQP HASIHFDRDK VASLGLTMTD
VGAAMSTMLG GSYANYFDLG GRSYKVIPQV MQQHRLNTDQ LLNYYIRAAD GTSVPLSTIA
RIEMKTVPQS LNHFQQLNAS TISGIAMPGV SDGDALAELR AVAARALPSG YSYDYAGSSR
QLENESNGFV TTFALALLII FLVLAALFNS FRDPLVILVS VPMSLAGALF FIWLGVGGAS
INIYTQVGLV TLMGLVSKHG ILMVEVANTL RQEGRSKHDA IIEAASIRLR AIMMTTAAMV
LGVTPLIVAT GAGANSRFNM GLVIATGLAI GTLFTLFVVP AFYLLLSHRD QTEPAPAVAS
A
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