| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3328 |
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| Symbol | |
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| ID | 3973015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3686678 |
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| End bp | 3688444 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926439 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_533189 |
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| Protein GI | 90424819 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCA ACACCTCAGT TTCGCGCGCC CTTCGGGTCT GCGTGCTCGG GCTGGCCACC
GTCACCGCGG CCGTGATTTA CACCACCGAC TCCGCCGATG CCCGCCGTCA CCGCTCTCGC
CCTCATGTCC GGCATCACGT TGCGACGGAA AGCTACAATC CGGCCTTCGC GTCGATCATC
GTCGACGGCA ATTCCGGCGA CATCCTCACC GCCAACAATC CCGATGGCCT GCGTCATCCA
GCGTCGCTGA CCAAGATCAT GACGTTGTAC TTGCTGTTCG AGCGTCTGGA ATCCGGCAAG
ATGCAGCTCG ACAGCGAAAT GGACGTCTCC GAACACGCCT CGATTCAGGC TCCGACCAAG
CTGGGACTGC GTCCTGGCCA GACCATCCGC GTCGAGGACG CGATCAAGGC GCTGGTCACG
CGATCCGCCA ACGACGCCGC CGTGGTGATT TCGGAAGCGA TCGCCGGCGA CGAAGGCGAC
TTCGCCAAGC TGATGACCAA GAAGGCGCGC TCGCTGGGCA TGACGCGGAC CGTGTACCGC
AACGCCTCGG GCCTGCCCGA CGACGACCAG GTCACCACCG CGCGCGATCA GGCCACGCTC
GGCCGCGCCG TCCAAGAGCG CTTCCCGCGC TATTATCGGT TCTTCTCGAC CAGCGTCTTC
AACTATCGCG GCAACGCGAT CCGCAATCAT AACAGGTTGC TGGGAAGCGT CGAAGGCGTC
GACGGCATCA AGACCGGCTA CACCCGGGCT TCCGGCTTCA ATCTCGTGAC CTCGATGCAC
CGCGGCAACC GCCATCTGAT CGGCGTGGTG CTGGGCGGCC GCAGCGGCGG CTCGCGCGAC
GCCATCATGC GCAACCTGCT CGCGGCGAAT CTCGACAAGG CCTCGACCCG GCGCACCGTT
ACCGCCGTCG CCGAACGCAG CACGTCGGAG GCGAATGCCG AGGTGGCCGA GGACGAGTCG
GACAATCGCC CGACCCGGAC GGTCCAGGTT CAAGGCGGCA TCCAAGCCCC GGTGCAAGTC
GCGTCGGCCA CCGCGGAGCC GGTTGCCACG CCGCGCCCCG CCGCTCCGAT TGCCCGATCA
TTGATCCCGC CGGCACAGGC CGTGCAGAAG CCGGAAACCG GGCCGCTCAA CAGCGGCGTC
GTTCAGCAGC AACTCGCAGC GATCCCCGGT TCGAACGAGC CGATGAAGCC GGTGCGCGTG
AAGACGGTCC AGGTCAAGGC CGGTGCCGTC AAGCTGGCCT CGGCCGGCTC GCCGCAGTCG
GCGCCGCCGA TCACCAATGC GATCCCGGCC CGCGCCGAAG TGGCCGAAAC CTCTGGGTCG
ATGATCGCCA AGGCCGATAC CATGCGCACG GAAACGGCGC GAATGATGCC GCCGCAGCCG
CTCAATCACG GCACCGGGCA AGGCGTGCTT GGCGTGCTGC CGGCCTCGGG CACCTCCTCC
TCGCAGGCCA TGGCCTATGC CGAACCGTCG CGCGGCCAGC CGCTGGCTAC GCAGCAGAAC
GGCACCGTCA AGCCGGCCGT ACGGAGCGGC TGGATCGTTC AGGTCGGCGC GCTGGACAGC
GAAAGCGAAG CCCGCCAGCG GCTCGAAGCC GCGCGCGAGC AGGCCCGCGG CACCCTCGCC
AAGGCGGAGC CCTTCACCGA GACGGTCGCC AAGGGCGACA AGAAGCTGTA TCGCGCCCGC
TTCGCCGGAT TGGATCGCGA CCAGGCCGAA GCGGTCTGCC GCGCGCTGAA GCGCTCCGAG
ATTTCCTGCA TCACCATCAA GAACTGA
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| Protein sequence | MHRNTSVSRA LRVCVLGLAT VTAAVIYTTD SADARRHRSR PHVRHHVATE SYNPAFASII
VDGNSGDILT ANNPDGLRHP ASLTKIMTLY LLFERLESGK MQLDSEMDVS EHASIQAPTK
LGLRPGQTIR VEDAIKALVT RSANDAAVVI SEAIAGDEGD FAKLMTKKAR SLGMTRTVYR
NASGLPDDDQ VTTARDQATL GRAVQERFPR YYRFFSTSVF NYRGNAIRNH NRLLGSVEGV
DGIKTGYTRA SGFNLVTSMH RGNRHLIGVV LGGRSGGSRD AIMRNLLAAN LDKASTRRTV
TAVAERSTSE ANAEVAEDES DNRPTRTVQV QGGIQAPVQV ASATAEPVAT PRPAAPIARS
LIPPAQAVQK PETGPLNSGV VQQQLAAIPG SNEPMKPVRV KTVQVKAGAV KLASAGSPQS
APPITNAIPA RAEVAETSGS MIAKADTMRT ETARMMPPQP LNHGTGQGVL GVLPASGTSS
SQAMAYAEPS RGQPLATQQN GTVKPAVRSG WIVQVGALDS ESEARQRLEA AREQARGTLA
KAEPFTETVA KGDKKLYRAR FAGLDRDQAE AVCRALKRSE ISCITIKN
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