| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3288 |
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| Symbol | |
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| ID | 3971744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3639185 |
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| End bp | 3640798 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926399 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_533149 |
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| Protein GI | 90424779 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATT TTGACGTACT GATCATCGGG GCCGGCCATA ACGGCCTGAC CTGCGCGGCT
TACCTCGCGA TGAGCGGGTT GCGCGTGAAG GTGGTCGAGC GCCGCGCCGT GGTCGGCGGT
GCGGCGGTAA CGCAGGAGTT TCACCCCGGC TTCCGCAATT CGGTGGCCGC CTATACCGTC
AGCCTGCTCA ACCCGAAGAT CATCGCCGAT CTGAAGCTGC ACGATCACGG GCTGCGCATC
GTCGAGCGCC GGGCGCAGAA CTTTTTGCCC GGACCGCACG GCCGCTACCT GCTCACCGGC
GAAGGCCGCA CCCAGCGGTC GGTCAAGAAG CTCAGCAAGG CCGACGCCGG CACGATCGAC
CGCTTCATGG CCGAGCTGGA AGCCGTCGCC GACGTGCTGC GGCGTTTCGT GCTGCGGGCG
CCGCCTAATT TGGTCGAGGG ATTCGGCGTC GGTGCGATCC GCGAGGCGAT CAACGCGCTC
GGCACCGCCA ACATTTTGCG CGGCCTGTCG CTGGCGCAGC AGCGCACATT GCTCGATTTA
TTCACCGGCT CGGCCGGCGA CATGCTGGAC GGCTGGTTCG AGAGCGATCT GGTCAAGGCG
CTGTTCGGCT TCGACGCCAT CGTCGGCAAT TACGCCAGCC CCTACGCTGC CGGTTCAGCT
TACGTGATGC TGCATCACGC CTTCGGCGAG GTGAACGGCA AGAAGGGCAT CTGGGGCCAC
GCGATCGGCG GCATGGGCGC GATCTCGGAA GCGATGGCGG CCTCCGCCCG CAGCGCCGGG
GCCGAAATCG AAACCTCGGC CGGGGTCCGC GAGGTTTTGG TGGAGCGCGA CCGCGTGGTC
GGGGTGACGC TCGACGACGG CCGCACCATC CGGGCGAAAT ATGTCGCCAG CAACGTCAAC
CCGAAGCTGC TCTATACCAA GCTGCTGCCG GCCAACGCGC AGCCCGAGGG ATTCCGCGAG
CGCATGACGC ATTGGCGCAA CGGCTCCGGC ACCTTCCGGA TCAACGTCGC GCTGAGCGAG
CTGCCCTCGT TCAGCGTGCT GCCCGGCGAA GGCGACCACC TCAGCGCCGG CATCATCATC
GGCCCCAGCT TGGGCTATAT GGACCGCGCT TGGCATGACG CCCGCGAACA CGGCTGGAGC
CGCGAGCCGG TGGTGGAGAT GCTGATCCCC TCGACGCTGG ACGATTCGCT GGCGCCGCCC
GGCCAGCACG TCGCCAGCCT GTTCTGCCAG CACGTCGCCC CGACGCTGCC CGACGGCGCG
TCCTGGGACC AGCACCGCGA CACCGTCGCC GACCTGATGA TCGCCACCGT CGACCGCCAC
GCCCCGGGAT TCGCGGCGAG CGTGATCGGC CGAAAGGCGC TGTCGCCGCT CGATCTGGAG
CGCGACTTCG GCCTGCTCGG CGGCGACATC TTCCATGGCG CGCTGTCGCT GAACCAGCTG
TTCTCGGCGC GGCCGATGCT CGGCTACGCC AACTATCGCG GCGCGGTGAA GGGACTCTAT
CACTGCGGCT CAGGCGCCCA CCCCGGCGGC GGCGTCACCG GCGCGCCGGG CCACAACGCA
GCAAGGGCGA TTTTGGCCGA CCACCGCGCG CTGTTCATGA CAAACCGGTT CTGA
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| Protein sequence | MPDFDVLIIG AGHNGLTCAA YLAMSGLRVK VVERRAVVGG AAVTQEFHPG FRNSVAAYTV
SLLNPKIIAD LKLHDHGLRI VERRAQNFLP GPHGRYLLTG EGRTQRSVKK LSKADAGTID
RFMAELEAVA DVLRRFVLRA PPNLVEGFGV GAIREAINAL GTANILRGLS LAQQRTLLDL
FTGSAGDMLD GWFESDLVKA LFGFDAIVGN YASPYAAGSA YVMLHHAFGE VNGKKGIWGH
AIGGMGAISE AMAASARSAG AEIETSAGVR EVLVERDRVV GVTLDDGRTI RAKYVASNVN
PKLLYTKLLP ANAQPEGFRE RMTHWRNGSG TFRINVALSE LPSFSVLPGE GDHLSAGIII
GPSLGYMDRA WHDAREHGWS REPVVEMLIP STLDDSLAPP GQHVASLFCQ HVAPTLPDGA
SWDQHRDTVA DLMIATVDRH APGFAASVIG RKALSPLDLE RDFGLLGGDI FHGALSLNQL
FSARPMLGYA NYRGAVKGLY HCGSGAHPGG GVTGAPGHNA ARAILADHRA LFMTNRF
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