| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3234 |
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| Symbol | |
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| ID | 3971900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3579665 |
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| End bp | 3580663 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637926345 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_533095 |
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| Protein GI | 90424725 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.230361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAT TGATTTTGGC CGCGGCGTCG GCCGCGATGT TCGCTGTTGT TGGGCCGGCT
GCGGCACAGT CGCCGATCGT CATCAAGTTC AGCCACGTGG TGGCGCCGAA CACCCCGAAG
GGTCTGGCCG CCGAAAAATT CAAAGAACTC GCCGAGAAGT ACACCGCCGG CAAGGTCAAG
GTCGAGGTCT ACCCGAACTC GCAGCTCTAC AAGGACAAGG AAGAGCTCGA AGCCTTGCAA
CTCGGCGCGG TGCAGATGCT GGCGCCGTCG AATTCCAAGT TCGGCCCGAT CGGCGTGCGC
GAATTCGAAG TGTTCGATCT GCCCTATATC CTGTCCGATC TGCCGACGCT GCGCAAAGTC
ACCGACGGCC CGCTCGGCAC CAAGCTGTTG AAGCTGCTCG ATGGCAAGGG CATGACCGGG
CTGGCCTATT GGGACAACGG CTTCAAGATC ATGAGTGCTA ACAAGAAATT GGTGGCGCCG
GCGGACTACA AGGGGCTGAA ATTCCGCATC CAGTCCTCCA AGGTGCTCGA CGCCCAGTTC
CGCGCGCTCG GCGCGATCCC GCAGGTGATG GCGTTCTCCG AAGTCTATCA GGCGCTGCAG
ACCGGCGTGG TCGACGGCCA GGAAAATACG CCCTCCAACA TGTACACCCA GAAAATGCAC
GAGGTGCAGA AGTTCACCAC GCTCACCAAT CACGGCTATC TCGGCTACGT GGTGATCGTG
AACAAGAAGT TCTGGGATGA CTTGCCGGCC AACCTGCGCA CCGAACTCGA CAAGGCGATG
AAAGAGGCCT CGGCCTACGG CAACAGCCTG TCCGCCAAGG AGAACGAAGA CGCGTTGGCC
GAGATGCAGA AGTCCGGCAA GACCGAACTC GTCAAGTTGA CGCCGGAGCA GGACGCCGCG
ATGCGCAAGG CGATGGAGTC GGTCTACGGC GACGTCGCCA ACCGAGTCGG CAAGCCGCTG
ATCGAAGAGT TCCTGAAGGA AACCAAGGCC ACCAATTAA
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| Protein sequence | MRKLILAAAS AAMFAVVGPA AAQSPIVIKF SHVVAPNTPK GLAAEKFKEL AEKYTAGKVK
VEVYPNSQLY KDKEELEALQ LGAVQMLAPS NSKFGPIGVR EFEVFDLPYI LSDLPTLRKV
TDGPLGTKLL KLLDGKGMTG LAYWDNGFKI MSANKKLVAP ADYKGLKFRI QSSKVLDAQF
RALGAIPQVM AFSEVYQALQ TGVVDGQENT PSNMYTQKMH EVQKFTTLTN HGYLGYVVIV
NKKFWDDLPA NLRTELDKAM KEASAYGNSL SAKENEDALA EMQKSGKTEL VKLTPEQDAA
MRKAMESVYG DVANRVGKPL IEEFLKETKA TN
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