| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3233 |
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| Symbol | |
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| ID | 3971899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3578966 |
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| End bp | 3579541 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926344 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_533094 |
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| Protein GI | 90424724 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.471576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTTC GCATCCTCGA TCGGCTTGAG GAAATCCTGA TCACGTTTTT GATCGGCGCC
GCCACGGTGA TCATCTTTTT CGCGGTGCTG CACCGCTACC TGGTCGGCAT TCCGCTGTTC
TATCCGCTGT TGTTCCCGAT CAACATGTCC TGGGCTCAGG AACTGTGCAT CTACATGTTC
GTGTGGATGG CGAAGTTCGG CGCGGCTTAC GGCGTGCGCA CCGGCATCCA TGTCGGCGTC
GACGTGCTGG TCAACCAGCT CGATCCGCGC TGGCGCAAGG GCACCATCCT GTTCGGGTTG
TTCTGCGGCG CGCTGTTCAC CGCGGTGATC GGCACCATGG GGGCGAAATT CGTCTATGGG
CTGATGCAGA CCGACCAGGT CACCCCCGAC ATGGAGCTGC CGAGCTGGAT CGTCTACCTG
TGCATTCCGC TCGGCTCCTA TCTGATGTGC TTCCGCTTCC TGCAGGTGGC GTGGACGTTC
GGACGCGGCG GCGAGCTGCC GCATCATGAC CACGCCTATG TCGAGGGCAT CGAGGCGGAA
ATCCCAGCCA CCGGCGGCCG GGAGGTGATC CGATGA
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| Protein sequence | MLLRILDRLE EILITFLIGA ATVIIFFAVL HRYLVGIPLF YPLLFPINMS WAQELCIYMF
VWMAKFGAAY GVRTGIHVGV DVLVNQLDPR WRKGTILFGL FCGALFTAVI GTMGAKFVYG
LMQTDQVTPD MELPSWIVYL CIPLGSYLMC FRFLQVAWTF GRGGELPHHD HAYVEGIEAE
IPATGGREVI R
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