Gene RPC_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3219 
Symbol 
ID3971941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3565778 
End bp3566422 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID637926329 
ProductSOUL heme-binding protein 
Protein accessionYP_533080 
Protein GI90424710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.918891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGT CGGTGTTCAG TTTCCTGCAA TCGGTGGTGT TCGGCATGAT TTCGATTTTC 
GGGATCAATC TGGGCACCGA GCAACCGCGT TACGACGTCA TCGCGCGGCT CGGCGACACG
ATCGAAATCC GGCACTATCC GGCGCGGCTC GCCGCCGAGA CCACCGTCGC GGGCAGTTCC
AGCAAGGCGC GCGGCGAGGC GTTCCGCATC GTCGCCGGTT ACATCTTCGG CGCCAACAAC
GGCCAGCAGA AGATCGCGAT GACCTCGCCG GTGGAAATCA GTTCGCCCGG CAGCAAGATC
GCGATGACCA CCCCGGTCGA GGTCGGCAAG GCCGACGACG GCTTGGTGAT GCGGTTCTTC
ATGCCCAGCG AATATTCCCG TGAGCAGCTT CCGCAGCCGT CCGACCCGCG GGTCAGGCTG
GTCGAACGCC CCGCCGCGAC CGTGGCCGCG CTGCGGTTTT CCGGCTCGAC CGGCGACGCC
GCGGTGGCGG CGCGCAGCGC CGAACTCGTT CATGCGCTCG CCGCCACCGA TTGGCGTGCC
GCGGGCGAGG TGACGGCGCT GTTCTACAAT CCACCGTGGA CGCTGCCGTT TCTGCGCCGC
AACGAGGTCG TGGTGCCGCT GACCAAGTCC GAGCAGCCGC GCTGA
 
Protein sequence
MLQSVFSFLQ SVVFGMISIF GINLGTEQPR YDVIARLGDT IEIRHYPARL AAETTVAGSS 
SKARGEAFRI VAGYIFGANN GQQKIAMTSP VEISSPGSKI AMTTPVEVGK ADDGLVMRFF
MPSEYSREQL PQPSDPRVRL VERPAATVAA LRFSGSTGDA AVAARSAELV HALAATDWRA
AGEVTALFYN PPWTLPFLRR NEVVVPLTKS EQPR