Gene RPC_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3212 
Symbol 
ID3972010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3559504 
End bp3560085 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID637926322 
ProductPRC-barrel 
Protein accessionYP_533073 
Protein GI90424703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.658486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAC GTTTCAGCAC GGCATTCGCA ATTGTCGCTT TGGTCAGTGT GGTGTCGGCA 
AGCTTGCGCG CCGAGCCATC GTCGACGACC GCATCGTCCA CCACCATCCA GCCGGCGCCG
CTCCCGGCCG CGCCGACCCA GCCGCCAGCG GCTGCGAGCG CGCCGGCAAC GCCCGCGCCC
AACAAAGCCG GTCCGTCCGA TGCGGCGAGC CCGAAGCCGC CGGCTTCGGT GACCGTGATC
AGCAATATCG AGGCCCGCGG CATTCTCGGC CGCGAAGTGC GCAGCGCGGC CGACGAAGAC
ATGGGCCGGA TCGTCGACGT CATCGTCGAC CGCGGCGGCC AAGTGCGCGC GGCGGTGATC
GACTTCGGCG GTTTTCTCGG CGTCGGCAGC CGCAAGATCG TCGTCGACTG GGCAGCGCTG
CGGTTCGGCA ACGTCACCCA CAAGGACGGG AAGATGACGC TGGAACTCAC CCGCGACCAG
GTGCGCGCGG CGCCGGAATA CAAGGACAAT CAGCCGATCG TGGCGCTCGG CGCTTCGGGC
AGCCTAGAAC CGCTGCGGTT CGCGCCGGCG ACGGAGCACT AA
 
Protein sequence
MQIRFSTAFA IVALVSVVSA SLRAEPSSTT ASSTTIQPAP LPAAPTQPPA AASAPATPAP 
NKAGPSDAAS PKPPASVTVI SNIEARGILG REVRSAADED MGRIVDVIVD RGGQVRAAVI
DFGGFLGVGS RKIVVDWAAL RFGNVTHKDG KMTLELTRDQ VRAAPEYKDN QPIVALGASG
SLEPLRFAPA TEH