Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3212 |
Symbol | |
ID | 3972010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3559504 |
End bp | 3560085 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637926322 |
Product | PRC-barrel |
Protein accession | YP_533073 |
Protein GI | 90424703 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.658486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATAC GTTTCAGCAC GGCATTCGCA ATTGTCGCTT TGGTCAGTGT GGTGTCGGCA AGCTTGCGCG CCGAGCCATC GTCGACGACC GCATCGTCCA CCACCATCCA GCCGGCGCCG CTCCCGGCCG CGCCGACCCA GCCGCCAGCG GCTGCGAGCG CGCCGGCAAC GCCCGCGCCC AACAAAGCCG GTCCGTCCGA TGCGGCGAGC CCGAAGCCGC CGGCTTCGGT GACCGTGATC AGCAATATCG AGGCCCGCGG CATTCTCGGC CGCGAAGTGC GCAGCGCGGC CGACGAAGAC ATGGGCCGGA TCGTCGACGT CATCGTCGAC CGCGGCGGCC AAGTGCGCGC GGCGGTGATC GACTTCGGCG GTTTTCTCGG CGTCGGCAGC CGCAAGATCG TCGTCGACTG GGCAGCGCTG CGGTTCGGCA ACGTCACCCA CAAGGACGGG AAGATGACGC TGGAACTCAC CCGCGACCAG GTGCGCGCGG CGCCGGAATA CAAGGACAAT CAGCCGATCG TGGCGCTCGG CGCTTCGGGC AGCCTAGAAC CGCTGCGGTT CGCGCCGGCG ACGGAGCACT AA
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Protein sequence | MQIRFSTAFA IVALVSVVSA SLRAEPSSTT ASSTTIQPAP LPAAPTQPPA AASAPATPAP NKAGPSDAAS PKPPASVTVI SNIEARGILG REVRSAADED MGRIVDVIVD RGGQVRAAVI DFGGFLGVGS RKIVVDWAAL RFGNVTHKDG KMTLELTRDQ VRAAPEYKDN QPIVALGASG SLEPLRFAPA TEH
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