| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3118 |
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| Symbol | |
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| ID | 3972974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3459392 |
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| End bp | 3460960 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637926227 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_532979 |
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| Protein GI | 90424609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.226388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATGC GGCTGTTGGC GTGGCGTCAT GTTCGGATCG CCCTGGCGCT GTCGATGTTG
TCGTGGCCGC TCGCGGCCGC GGCGCAGGAG GCAACGTCGG CGGCTCCGCC CGGCGCGCAG
AAGACCGGCG CGCCGTCGCA GAGCGGCTCA TCGCCGGCAT CCGCCGCCGA TCAGCACCGC
CTGCCGCCGG ACTCCATCAC GCAGCACAAG CTGAGCCTCG CCGGCCGCAC GCTCAGCTTC
AGCGCCACCG CGGGATCGAT CCGGCTGTTC GACGACAAGG GCGAGCCGCA GGCCGATATC
GCTTACACTT CCTATCAACG CGACGGCGGC GAGCCGGGTA GCCGCCCGGT GACCTTCCTG
TTCAACGGCG GCCCGGGGGC GTCGTCGGCC TGGCTGCAAT TCGGCGCCGC CGGGCCGTGG
CGGCTGACGT TCGACGCCGA GGGCCCGAGC GCGTCGGCGA CACCGGAGCT GCAGCCCAAC
GCCGAGACCT GGCTCGACTT CACCGATTTG GTGTTCATCG ATCCGGTCGG CACCGGCTAC
AGCCGCTTCG TCGCCAGCGG CGAGGCGGTG CGCAAACGGT TCTATTCGGT CGACGGCGAC
GTCGCTTCGA TCGCGCTGGT GATCCGCCGC TGGCTGGAGA AATCCGACCG GCTGCTGTCG
CCGAAATTCG TCGCCGGCGA AAGCTATGGC GGGATTCGCG GGCCGAAGAT CGTGCACGAT
CTGCAGACCG AGCAGGGCAT CGGCGTGAAG GGCCTGATCC TGGTGTCGCC GCTGTTCGAC
TTCCGCGACT ATTCCGGCTC CAGCCTTCTG CAATACGTCG CCAGGCTGCC CAGCATGGCG
GCGACCGCGC GGCAACTCAA AGCGCCGGTC GGCCGCGCCG ACGTCGCCGA CGTCGAGGCC
TATGCGGGCG GCGATTTCCT GCGCGATCTG CTCAAAGGCC AGGCCGACGC CGAGGCGACC
AGCCGGTTGG CCGACCGGGT CGCGGCGCTG ACCGGGATCG ATCCCTCGGT CAGCCGGCGG
TTGGCCGGGC GGTTCGACGT CTCCGAGTTT CGCCGCGAGT TCGATCGCCG CAACGGTCGG
GTGACCGGCC GCTACGATGC GTCGGTGACG GGCTTCGATC CCTATCCGGA CTCCAACGCG
GCGCGTTTCG ACGATCCGTC GCTGGAGCCG TTGCTGGCGC CGCTCACCAG CGCGGCGATC
GATCACACCG CGCGGCGGCT GAACTGGCGG CCGGACGGCT CCTATCGGCT GCTCAATGGC
GCGGTGGCGG GGGCGTGGGA TTTCGGCCGC GGTCGCCACC CGCCGGAGTC GGTGTCGCAG
CTGCGCCAAG TGCTGGCGCT CGATCCGACG TTCAAGCTGT TGGTGGCGCA CGGCCTGTTC
GATCTGGCGA CGCCGTATTT CGCATCGAAG ATCATCCTCG ATCAGCTACC GGCCTATGCC
TCGACGGATC GCGTCCAGCT CGCGGTCTAT CCCGGCGGCC ACATGTTCTA CTGGCGCGAT
GCGTCGCGCC AGGCGCTGCG CGCCGAAGTC GCGGCGATGA TCCAGGACGG CCGCGCGGTC
AGCCGTTGA
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| Protein sequence | MVMRLLAWRH VRIALALSML SWPLAAAAQE ATSAAPPGAQ KTGAPSQSGS SPASAADQHR
LPPDSITQHK LSLAGRTLSF SATAGSIRLF DDKGEPQADI AYTSYQRDGG EPGSRPVTFL
FNGGPGASSA WLQFGAAGPW RLTFDAEGPS ASATPELQPN AETWLDFTDL VFIDPVGTGY
SRFVASGEAV RKRFYSVDGD VASIALVIRR WLEKSDRLLS PKFVAGESYG GIRGPKIVHD
LQTEQGIGVK GLILVSPLFD FRDYSGSSLL QYVARLPSMA ATARQLKAPV GRADVADVEA
YAGGDFLRDL LKGQADAEAT SRLADRVAAL TGIDPSVSRR LAGRFDVSEF RREFDRRNGR
VTGRYDASVT GFDPYPDSNA ARFDDPSLEP LLAPLTSAAI DHTARRLNWR PDGSYRLLNG
AVAGAWDFGR GRHPPESVSQ LRQVLALDPT FKLLVAHGLF DLATPYFASK IILDQLPAYA
STDRVQLAVY PGGHMFYWRD ASRQALRAEV AAMIQDGRAV SR
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