Gene RPC_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3114 
SymbolfolE 
ID3972970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3456247 
End bp3456951 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID637926223 
ProductGTP cyclohydrolase I 
Protein accessionYP_532975 
Protein GI90424605 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.942606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.532138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TGATCAAGCC GCTGCGCGCC GGCAAGCCCG ACGCCAAGCC CGCAGACCCC 
AAGGGTACGG AATTCAGGCC CGCCGAACTC GATCCCGCGG AGTTTCTCGC CGCCGCCGTG
AAGCCCGACC AGCCGCGGCC GTCGCGCGGC GAGGCCGAGC AGGCGGTCAA GACGCTGCTG
GCCTATATCG GCGAAGACAC CGCACGAGAG GGGCTGTTGG ATACGCCGCG TCGCGTGGTC
GAAGCCTATG ACGAGCTGTT CCAGGGCTAC CACCAGTGCC CGGCCGAGGT GCTGAACCGC
ACCTTCGGCG AGACCGCGGG CTATGACGAT TTCGTGCTGA TCCGCGACAT GAGCTTCACT
TCGCATTGCG AGCATCACGT GATGCCGTTC TACGGCAAGG CGCATATCGC CTATACGCCG
GTGGAGCGCG TCGTCGGGCT GTCGAAGCTG GCGCGGCTGG TCGACATCTT CGCGCACCGG
CTGCAGACCC AGGAGCATCT CACCGCGCAG ATTGCCGCGG CGGTCGACGA AGTGCTGAAG
CCGCGCGGCG TCGCGGTGAT GATCGAGGCC GAGCATACCT GCATGTCGGT GCGCGGCATC
GCCAAGCAGG GCGCGGTGAC CTTCACCAGC CGCTTCACCG GCATGTTCCG CGACAATCCG
GCGGAGCAGG CCCGCTTCAT GTCGATGATC CGCGGGGGGC GCTAA
 
Protein sequence
MDALIKPLRA GKPDAKPADP KGTEFRPAEL DPAEFLAAAV KPDQPRPSRG EAEQAVKTLL 
AYIGEDTARE GLLDTPRRVV EAYDELFQGY HQCPAEVLNR TFGETAGYDD FVLIRDMSFT
SHCEHHVMPF YGKAHIAYTP VERVVGLSKL ARLVDIFAHR LQTQEHLTAQ IAAAVDEVLK
PRGVAVMIEA EHTCMSVRGI AKQGAVTFTS RFTGMFRDNP AEQARFMSMI RGGR