| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3103 |
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| Symbol | |
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| ID | 3972959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3445945 |
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| End bp | 3446655 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926212 |
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| Product | OmpA-like transmembrane region |
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| Protein accession | YP_532964 |
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| Protein GI | 90424594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.309907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.21357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAAGC TCTTGCTCGG GACGGCCGCC CTGATGGTCC TTGCGGCGCC TGCCTTCGCT
GCCGATTTGC CGGCGCCGAC CTACACCAAG GCGCCGGCCT ACACCGCGCC GGAAGTGGTC
TACAACTGGA CCGGTTTCTA CATCGGAGGC CACGTCGGCG GCGCCTTCGC CGGCGACAAC
AACATTTCCG GCAACGATGG CCAATTCCTC GGCGGTGTGC AGATCGGCGC CGATTATCAA
TTCACGCGGA ACTGGGTGGT CGGTCTCGAG GCGCAGTACA GCTGGCTGCC GTCGAACGAC
AATGGCGGTC TGGCGTTCCC CGGCGGATCG CTGGTCACGC AGGACAATCG CGGGCTGGGT
TCGGTGACCG GGCGGCTCGG CTACACCTGG GGTCCGGCGT TGCTGTATGC CAAGGGCGGT
TATGCATTCC GCGACTCCAG CCTCGACCTG AGCAACACGG GCGTGGGCGT GCCCTTCACC
ACCAGCGGCA ACCATCGCGA CGGTTACACC GTGGGTGCCG GCCTCGAATA CATGTTCGCG
CCGAACTGGT CGGCCAAAGT GGAGTATCAG TACTACGATT TCGGCAACAC CACCTTCACC
GGCGGCCCGC CGGATGTGCT CGGTGCCAGC GTTCGCAACG ACGAACACAC CGTCAAGGCC
GGCTTGAACT ATCGTTTCGG CTGGGGTGGC CCGGCGGTCG CAAAATACTA A
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| Protein sequence | MRKLLLGTAA LMVLAAPAFA ADLPAPTYTK APAYTAPEVV YNWTGFYIGG HVGGAFAGDN
NISGNDGQFL GGVQIGADYQ FTRNWVVGLE AQYSWLPSND NGGLAFPGGS LVTQDNRGLG
SVTGRLGYTW GPALLYAKGG YAFRDSSLDL SNTGVGVPFT TSGNHRDGYT VGAGLEYMFA
PNWSAKVEYQ YYDFGNTTFT GGPPDVLGAS VRNDEHTVKA GLNYRFGWGG PAVAKY
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